Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g01958 ATGGGTGGCTTAGCTAAGATAAGAAGACACCATGTTGTGAGCCTGGTGGTGGCAATAGGATTGTGCATCACTGTTGTTGAATGCACCAAACATGTGAGCATCAAGAACAGCCTAGGACCTGGAAAAAACATGACTTTGCATTGCCAGTCCAAGGACAATGATCTGGGACAGCAAAACATACAAAATGGGGATGAGTTTGGGTGGGACTTCTCTGACAATGTTTTTGGAACCACGCTGTTTTTCTGTGATCTGGGGTGGCAAAATGTTGAGAGCTACCATTTTGATGCTTATTCCTTCGGCAGGGACAGGGTACGATGTGATGGTGCAGGATGTTCATGGCTAGTGTCTGCTGAAGGCATTTATGGCTTCAATGGACAAACGGGCTTCTGGGAATTCATGTTCCAGTGGCCAAATTAA 417 0.458 MGGLAKIRRHHVVSLVVAIGLCITVVECTKHVSIKNSLGPGKNMTLHCQSKDNDLGQQNIQNGDEFGWDFSDNVFGTTLFFCDLGWQNVESYHFDAYSFGRDRVRCDGAGCSWLVSAEGIYGFNGQTGFWEFMFQWPN* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g01958 138 Pfam Plant self-incompatibility protein S1 31 136 IPR010264 -
Phac3g01958 138 PANTHER - 27 124 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g01958 Phac-Chr3 22419688 22420165 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g01958 32 136 Carbohydrate Esterase AT3G16970 32.710 1.11e-12 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g01958 - - gmx:102670225 244.973