Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g01951 ATGGCTGGTGTGAACCCCGTGGGAGCAGAAGGGTGGAAGCTTTATCCTCCTTCTGCTATGGAAATTGCTCTTGATACTGTTGATGGAAGGAGTGAGAACATGGAGGTCCGCAACACCTTAATTGATGATGGCTCCACGCATTTCTCTGCTACCAGGCCAGTGGCAGTGCCATCATCTGGACAGACTAAAGCGATTCCTAGTCCAACCACGTTTAGCATCCTCTATAAGGGGAATATGTGTATTTACGAAGGAATTCCCGCAGAGAAGGTGCGTGAAATAATGTTGATTGCTTCTGTCTCTGCTAAGTCTGCTGAAATTAAGAGTGGGGTTCCTTGGGCTTCACACATTTCCAAAAGTCCTTCTTCTCTACTGGGAAACTCTACTAATTGTGCAAAGAAGAGTTCCATTCTAAGGCTGCAAGAGGAATTTCCATTATCACGCAGACAATCACTTCAAAGGTTTCTCGAGAAGCGAAGTAACAGGTTGGCTAACAAAGCCCCTTACGCCTCAACGAAAAACATGGCTCACAACATAGAGAACAACTTCTGCTCTGACATGTCACATTTTGGTTCCTTGGACTGTCAGAAGAGCAATTTCAGCCCAGTTTTGTCGCCTCTTTAA 621 0.4541 MAGVNPVGAEGWKLYPPSAMEIALDTVDGRSENMEVRNTLIDDGSTHFSATRPVAVPSSGQTKAIPSPTTFSILYKGNMCIYEGIPAEKVREIMLIASVSAKSAEIKSGVPWASHISKSPSSLLGNSTNCAKKSSILRLQEEFPLSRRQSLQRFLEKRSNRLANKAPYASTKNMAHNIENNFCSDMSHFGSLDCQKSNFSPVLSPL* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g01951 206 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 51 173 IPR040390 -
Phac3g01951 206 SMART tify_2 64 99 IPR010399 -
Phac3g01951 206 Pfam tify domain 66 98 IPR010399 -
Phac3g01951 206 ProSiteProfiles Tify domain profile. 64 99 IPR010399 -
Phac3g01951 206 Pfam Jas motif 144 168 IPR018467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g01951 Phac-Chr3 22334983 22338420 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g01951 68 171 Tify Gene Family AT5G20900 34.211 5.90e-16 71.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Phac3g01951 tify 1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g01951 K13464 - gmx:100306282 243.817