Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac3g01947 | ATGGGGTTCTACGTTGAAGACCCTCTCTCTGGCTTCACAATAGGGCAGGCCATATACGAGGCAGCTCTCATCATTGCAGTTCTGAGATGGGTCTTATGCTTCCTCTTCACACTCATCAACGACACAAGAACAAGCTCTGAAGACACCCCACCTCAATCTTGTCCTCAGACCACAAGAGACAGGGACACCACCCTTCTGCTCACCACCTTCGGGGAGATTAAGGAGAGGCTCCCACGCACAGAGGACACGTGTGCGGTTTGCCTCAACCAGCTTGAGGTGGAGGACGAGGTTCGGGAGCTCATGAACTGTTACCACGTGTTCCACAGAGAGTGCATAGACCGATGGTTGGAGCATGAGCACGAGAATCACAACCCCACCTGTCCACTCTGCAGAGCCCCTTTGCTGAGTTCTTGCTGCCACCACAACTCCGCCACTTCTCAGCCTCCTCCTCAGCCTAGTTGGGCTGTGGAGAGACTTCTCTATCTCTTTGGGGATGATTTGCTACCTTGTTAG | 513 | 0.5341 | MGFYVEDPLSGFTIGQAIYEAALIIAVLRWVLCFLFTLINDTRTSSEDTPPQSCPQTTRDRDTTLLLTTFGEIKERLPRTEDTCAVCLNQLEVEDEVRELMNCYHVFHRECIDRWLEHEHENHNPTCPLCRAPLLSSCCHHNSATSQPPPQPSWAVERLLYLFGDDLLPC* | 171 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac3g01947 | 170 | ProSiteProfiles | Zinc finger RING-type profile. | 84 | 131 | IPR001841 | - | |
Phac3g01947 | 170 | SUPERFAMILY | RING/U-box | 79 | 137 | - | - | |
Phac3g01947 | 170 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 79 | 136 | IPR013083 | - | |
Phac3g01947 | 170 | SMART | ring_2 | 84 | 130 | IPR001841 | - | |
Phac3g01947 | 170 | PANTHER | RING ZINC FINGER PROTEIN-RELATED | 26 | 168 | - | - | |
Phac3g01947 | 170 | Pfam | Ring finger domain | 82 | 131 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac3g01947 | Phac-Chr3 | 22295725 | 22296922 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac3g01947 | 1 | 167 | C3H Transcription Factor Family | AT5G20885 | 46.111 | 3.08e-42 | 137 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac3g01947 | K16281 | - | gmx:100306203 | 294.664 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Phac3g01947 | 3 | 22295725 | 22296922 | Phac3g01947 | 3 | 22295725 | 22296922 | ECH |