Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g01942 ATGGCTGTGTCTTCACCCAGATACCGTTCCGCCCTCGCATGCTCCTTCTTCTGTCTTTTCTTTCTCGCACTCTGCACCCCTCGCACCGCCGCCACAGATTTCGCCGGTTCAGCTTGCCTCGGGGTCTCCCCCACCCAATTCGCCGGCTCACTCACCCAAGTCATCTCCGCCGTCAAACAACTCACATCCATTCTCTCACGCTTCTCCACGCCCTTCGCCGACTTCCGCCTCGCCACTGCCGTCGCCGACTGCCTCGACTTGCTCGACCTCTCCTCCGACGTCCTCTCCTGGGCCCTCTCCGCCTCTCAGAACCCCAAAGGGAGGCATAACAGCACGGGGAAGCTGAGTTCCGATTTGAGGACATGGCTAAGTGCGGTACTTGCGCATCCTCAAACTTGCATGGATGGATTCGAAGGGACGAACGGCATTGTGAAGAGCTTGGTATCCGCTGGCATCGGCGAAGTGGTGTCGTTGGTGGAGCAGCTTCTTGCGCAGGTGGTGCCCGTAGACGATGAATTTGACGCCAGCAAGGGACAAATTCCGTCGTGGGTTAAACCCAGGGAAAGGAAGCTTCTGCAATCGATTGGAGTGAGTCCTGATGCTGTGGTAGCTTTGGATGGGAGTGGGAACTACGCCAGAATCATGGATGCGGTGCTTTCGGCGCCCGATTATAGCATGAAACGGTTCGTGATTTACATAAAGAAAGGTGTTTATGTTGAGAACGTGGAGATCAAGAAGAAGAAATGGAACATCATGATGGTTGGAGATGGGATGGACGCCACAGTGATCTCCGGTAACCGGAATTTCATCGACGGTTGGACCACCTTCCGCTCATCTACATTCGCTGTGAGTGGCAGAGGGTTCATAGCAAGAGACATTTCCTTTCAGAACACGGCAGGGCCTGAGAAGCACCAAGCAGTGGCACTGAGATCAGACTCGGACCTCTCAGTGTTCTACCGATGTGGGATTTTGGGCTTCCAAGACAGCCTATACACTCACACCATGCGCCAATTCTTCAGAGAGTGCAGAATAACAGGCACAGTGGACTTCATCTTCGGCGACGCCACTGCCATGTTCCAGAACTGCTTAATACAAGCGAAGAAGGGCTTGCCAAATCAAAAGAACACTATCACAGCACAGGGTAGAAAAGACCCAAATGAGCCAACAGGTTTCTCATTCCAGTTCTGCAACGTCACTGCAGACTCTGACCTTGCACCCTTGGTCAGCACCACTCAAACGTATCTGGGCAGACCCTGGAAGACCTACTCACGAACCGTTTTTATGCAATCGTTCATGAGTGAGGTGATAAGGTCAGAGGGGTGGTTGGAGTGGAATGGAAACTTTGCTTTGGACACATTGTATTATGCTGAGTACCTGAACACCGGGGCAGGTGCTGGCATAGCTAACCGTGTTAAATGGAGAGGGTACCATGCATTCAATGATTCAAGCCAGGTGAGTAACTTCACAGTGGCTCAGTTTATTGAGGGGAATCTGTGGTTGCCTTCCACTGGAGTAACCTACACTGCTGCATTCACAGTTTAA 1542 0.524 MAVSSPRYRSALACSFFCLFFLALCTPRTAATDFAGSACLGVSPTQFAGSLTQVISAVKQLTSILSRFSTPFADFRLATAVADCLDLLDLSSDVLSWALSASQNPKGRHNSTGKLSSDLRTWLSAVLAHPQTCMDGFEGTNGIVKSLVSAGIGEVVSLVEQLLAQVVPVDDEFDASKGQIPSWVKPRERKLLQSIGVSPDAVVALDGSGNYARIMDAVLSAPDYSMKRFVIYIKKGVYVENVEIKKKKWNIMMVGDGMDATVISGNRNFIDGWTTFRSSTFAVSGRGFIARDISFQNTAGPEKHQAVALRSDSDLSVFYRCGILGFQDSLYTHTMRQFFRECRITGTVDFIFGDATAMFQNCLIQAKKGLPNQKNTITAQGRKDPNEPTGFSFQFCNVTADSDLAPLVSTTQTYLGRPWKTYSRTVFMQSFMSEVIRSEGWLEWNGNFALDTLYYAEYLNTGAGAGIANRVKWRGYHAFNDSSQVSNFTVAQFIEGNLWLPSTGVTYTAAFTV* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g01942 513 PANTHER PECTINESTERASE 57 501 - -
Phac3g01942 513 Gene3D Invertase/pectin methylesterase inhibitor family protein 17 167 IPR035513 -
Phac3g01942 513 SMART PMEI_2 30 165 IPR006501 GO:0004857
Phac3g01942 513 SUPERFAMILY Pectin lyase-like 196 508 IPR011050 -
Phac3g01942 513 ProSitePatterns Pectinesterase signature 1. 225 244 IPR018040 -
Phac3g01942 513 FunFam Pectinesterase 194 511 - -
Phac3g01942 513 ProSitePatterns Pectinesterase signature 2. 344 353 IPR033131 -
Phac3g01942 513 CDD PMEI-like_4 14 169 - -
Phac3g01942 513 Gene3D - 195 511 IPR012334 -
Phac3g01942 513 Pfam Pectinesterase 200 497 IPR000070 GO:0030599|GO:0042545
Phac3g01942 513 Pfam Plant invertase/pectin methylesterase inhibitor 41 149 IPR006501 GO:0004857
Phac3g01942 513 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 50 162 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g01942 Phac-Chr3 22189247 22193357 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g01942 16 511 Carbohydrate Esterase AT3G43270 61.209 0.0 669
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g01942 K01051 - gmx:100814987 832.017