Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g01941 ATGGCTATTGCATCTCCTAAACTTTTCCTCCTTCTTTTAACATTCTTCTTCTCACATACTATAGCTGTTGAGTCCTTCAATGCTTTCACAATCCCAACATTCCATGCAAACATCTCTTCCTTAAACAGAACAAATTTATTTCATGAAGTTAGGTTCAACTCATCTAAGCTTTCTATCTCAATAACCATAAATCCAAACATCATCAACACCCTTCTTCAGTCCCTCCAAGCAGCAATAACCGATGCCACAAAACTATCTGATCTTTTAAACAATGCAGGACACTCAAGCATCATAGAGAACAAAATAGGAGCAGTCCAAGACTGTAGAGAACTTCAACAATCCACTTTAGCTTCCTTAGAACGATCGCTATCAGGGATCCGTTCCCAAGACTCCAGAAAAGTAGTTGATGCCAGAACCTACCTCAGTGCAGCCCTCACCAACAAAGGCACGTGTCTAGAGAGCTTAGATTCTGCTTCGGGTACCCTTAAGCCAGTTCTGGTGAACTCTGTTATCAATTCTTACAAGCATGTCAGTGACTCTCTTTCAATGCTCCCTAAGCCTGAGAAGAAGGCTTCCCGAGGACACAAGAACCGGCGTTTGTTGTGGTTGTCAAGGAAAAACCATCGCCTCTTGAAAGGCAATGATGGGGTGCTTGTTGTAGCTGCAGATGGAACGGGGAGGTTTAGCACCATCACTGAGGCTATCAACTTTGCTCCAAACAACAGCGTTGGTAGGACAGTAATCTATGTCAAAAAAGGGATTTACGAGGAAAATGTTGAAATCCCAAGCTATAAGACCAATATTGTTTTGCTTGGCGATGGAAAAGATGTCACTTTTATCACTGGCAGCAGAAGTGTCATTGATGGGTGGACCACTTTCAGATCTGCAACTCTAGCGGTCTCTGGAGAGGGTTTTCTTGCACGTGATATTGCTTTTGAGAACAAGGCAGGGCCAGAGAAGCATCAAGCAGTTGCCTTAAGAGTGAATGCAGACTTCACTGCTTTCTACAGGTGTGCCATGTATGGTTACCAAGACACTCTTTATGTTCACTCCTTTAGACAATTCTACAGAGAGTGTGACATTTTTGGGAGCATAGATTACATATTTGGGAATGCCGCAGTGGTTTTACAAGCATGCAACATTGTGTCCAGGATGCCAATGCCAGGCCAATTCACAGTCATCACTGCACAGTCCAGAGATTCCCCTGATGAGGACACTGGCATTTCAATCCAAAACTGCTCGATTCTAGCTACCACAGACTTGTACTACAATTCTGGCAGTGTGAAGAGCTACCTAGGAAGGCCATGGAGGGTTTATTCTCGTACTGTGTACCTTGAGTCCTACATTGATGCATTTATTGACCAAGAGGGGTGGACCAAGTGGTCCAACGATGAAGGCTTGGACACTTTGTATTACGGAGAGTATGCCAATTATGGGCCTGGTTCAGGTACAGATAACAGAGTACACTGGGTTGGCTACCATTTAATGGATTACGACAGTGCCTACAACTTCTCAGCTTCGGAATTTATAATTGCTGATGCTTGGCTTGGGTCTACATCATTCCCTTATGATAATGGGATCTAA 1584 0.4369 MAIASPKLFLLLLTFFFSHTIAVESFNAFTIPTFHANISSLNRTNLFHEVRFNSSKLSISITINPNIINTLLQSLQAAITDATKLSDLLNNAGHSSIIENKIGAVQDCRELQQSTLASLERSLSGIRSQDSRKVVDARTYLSAALTNKGTCLESLDSASGTLKPVLVNSVINSYKHVSDSLSMLPKPEKKASRGHKNRRLLWLSRKNHRLLKGNDGVLVVAADGTGRFSTITEAINFAPNNSVGRTVIYVKKGIYEENVEIPSYKTNIVLLGDGKDVTFITGSRSVIDGWTTFRSATLAVSGEGFLARDIAFENKAGPEKHQAVALRVNADFTAFYRCAMYGYQDTLYVHSFRQFYRECDIFGSIDYIFGNAAVVLQACNIVSRMPMPGQFTVITAQSRDSPDEDTGISIQNCSILATTDLYYNSGSVKSYLGRPWRVYSRTVYLESYIDAFIDQEGWTKWSNDEGLDTLYYGEYANYGPGSGTDNRVHWVGYHLMDYDSAYNFSASEFIIADAWLGSTSFPYDNGI* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g01941 527 Pfam Pectinesterase 218 512 IPR000070 GO:0030599|GO:0042545
Phac3g01941 527 Gene3D - 215 527 IPR012334 -
Phac3g01941 527 SMART PMEI_2 54 183 IPR006501 GO:0004857
Phac3g01941 527 NCBIfam pectinesterase inhibitor domain 66 184 IPR006501 GO:0004857
Phac3g01941 527 FunFam Pectinesterase 213 527 - -
Phac3g01941 527 PANTHER PECTINESTERASE 66 517 - -
Phac3g01941 527 Pfam Plant invertase/pectin methylesterase inhibitor 74 183 IPR006501 GO:0004857
Phac3g01941 527 Gene3D Invertase/pectin methylesterase inhibitor family protein 52 186 IPR035513 -
Phac3g01941 527 CDD PMEI-like_3 55 189 - -
Phac3g01941 527 ProSitePatterns Pectinesterase signature 2. 361 370 IPR033131 -
Phac3g01941 527 FunFam Pectinesterase 34 186 - -
Phac3g01941 527 SUPERFAMILY Pectin lyase-like 216 524 IPR011050 -
Phac3g01941 527 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 64 184 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g01941 Phac-Chr3 22182923 22185260 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g01941 39 527 Carbohydrate Esterase AT2G26440 64.902 0.0 664
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g01941 - K01051 gmx:102666380 892.493