Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g01940 ATGGCGTTTCAGGATTTTGACCTCATCTCAGAGCGGCGGAGAAACGAGAAGAAGCAAAAGATGAGGAAGAGGATCATGATCGGCGTGGTTTCTTCCATCGTCCTCGTTGGCATGATCGGTGCAGTTCTCTTCGTCGTGGTTAAGAATGATGACGCTGGCAATAACAAGAGCACTAACAACAAGTCACGTACTAGCCATTCACCATCACACTCAGAAGGTGGCTCGCTCAAGGAGCACGTGACGCACTCGGAGAAGATTGTGCAAATGGTGTGCAGCTCCGCTGATTTCAAGGACAGGTGTGAAGGCCCTCTGAACAAGGCCATGCAGGATGACCCCAAACTCTCCGAACCCAAAGACCTTCTGAAGATCTACGTGAAGCTCGCAGAGGAAGAGCTTTCCAAGGCCTTCAACAACACCCAGTCGGTTAAGTTCGACAGTGAGGAAGAGAAAGGAGCGTTTGAGGATTGCCAGAAGCTGTTTGAGGATGCCAAGGATGACATCGCAACCTCTATCTCTGAACTTTCCAAAACTGAGCTCAAGAATATCTCTGACAAGACTCCCGATTTGAACAGCTGGCTCAGTGCTGTCATCTCCTTCCAACAGACCTGCATGGATGGCTTCCCTGAGGGAAACATCAAGACTGAACTTCACAATCTCATGAACGATTCCAAGGAATTCGTTAGCAACTCCCTTGCCATTCTCTCTCAGGTGGCATCGGCTCTTTCTACATTACAAAACGTTGGCGCACCCTCACATGGCCGCTCCTTGCTATCTTCCAACTCCCCGGCTACTTCTCTCGACAAAACCGATGGCTTTCCCTCTTGGATCAACCAAGAGGACCGCAGGATCTTGAAGGCCGTCGATAACAAACCTGCACCTAATGTCACTGTGGCAAAAGATGGCAGCGGAAACTTCAAAACCATCTCTGAATGTTTGAATGCTGTCCCTCAAAACTATGAAGGACGGTATGTGATTTACGTTAAAGAAGGAATATACGACGAGCCAGTGAAGATTACAAAGAAAATGCAAAACATAACCATGTATGGTGATGGATCCCAAAAGACCATCGTGACTGGCAACAAAAACTTCAGGGACGGAGTCAGGACTTTCCTCACGGCCAGTTTTGTGGTGGAGGGAGATGGATTCATAGGCATGGCAATGGGATTCAGAAACACCGCAGGCCCTGGTGGGCATCAAGCAGTGGCCGCAAGAGTGCAGGCGGATCGTTCAGTGTTTGCGAACTGTCGGTTTGAGGGCTACCAAGACACTCTATACACCCAAGCCCACAGACAATTCTACAGGAGTTGCATCGTAACAGGCACAATCGACTTCATCTTCGGTGATGCAGCTGTGGTGCTCCAGAACTGCATCCTGATTATTAGGAAGCCAGATGATAACCAGCAGAACATGGTGACAGCTCAAGGGAGAGAGGACAAGCAGCAAGCGACTGGAATCGTGCTGCAGAAGTGCACAATCAAAGCTGATGACGAACTGCTAACAGTGAAGGACAAGATAAGGAGCTACCTTGGAAGGCCATGGAAGCAGTACTCAAGAACCGTTGTGATGGAATCAGAAATAAGTGACATCATTCACCCTGATGGATGGACGGCTTGGAATGGAGACTTTGCTCTGAAAACATTGTACTATGCTGAGTACGGTAACACAGGAGCTGGTTCCTCCACCAACGCTAGGATCAAGTGGCCTGGTTACCGAGTGATCAACAAGGAAGAAGCTACCATGTTCACTCCAGGCTCTTTCTTGAGAGGCTCATGGGTCCAGAGCACAGGAGTGCCCTCTACGCAAGGCTTCTACAATTAA 1818 0.4906 MAFQDFDLISERRRNEKKQKMRKRIMIGVVSSIVLVGMIGAVLFVVVKNDDAGNNKSTNNKSRTSHSPSHSEGGSLKEHVTHSEKIVQMVCSSADFKDRCEGPLNKAMQDDPKLSEPKDLLKIYVKLAEEELSKAFNNTQSVKFDSEEEKGAFEDCQKLFEDAKDDIATSISELSKTELKNISDKTPDLNSWLSAVISFQQTCMDGFPEGNIKTELHNLMNDSKEFVSNSLAILSQVASALSTLQNVGAPSHGRSLLSSNSPATSLDKTDGFPSWINQEDRRILKAVDNKPAPNVTVAKDGSGNFKTISECLNAVPQNYEGRYVIYVKEGIYDEPVKITKKMQNITMYGDGSQKTIVTGNKNFRDGVRTFLTASFVVEGDGFIGMAMGFRNTAGPGGHQAVAARVQADRSVFANCRFEGYQDTLYTQAHRQFYRSCIVTGTIDFIFGDAAVVLQNCILIIRKPDDNQQNMVTAQGREDKQQATGIVLQKCTIKADDELLTVKDKIRSYLGRPWKQYSRTVVMESEISDIIHPDGWTAWNGDFALKTLYYAEYGNTGAGSSTNARIKWPGYRVINKEEATMFTPGSFLRGSWVQSTGVPSTQGFYN* 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g01940 605 CDD PMEI-like_3 90 239 - -
Phac3g01940 605 MobiDBLite consensus disorder prediction 53 79 - -
Phac3g01940 605 Gene3D Invertase/pectin methylesterase inhibitor family protein 83 238 IPR035513 -
Phac3g01940 605 PANTHER PECTINESTERASE 42 593 - -
Phac3g01940 605 MobiDBLite consensus disorder prediction 53 71 - -
Phac3g01940 605 NCBIfam pectinesterase inhibitor domain 81 237 IPR006501 GO:0004857
Phac3g01940 605 SUPERFAMILY Pectin lyase-like 291 602 IPR011050 -
Phac3g01940 605 MobiDBLite consensus disorder prediction 251 271 - -
Phac3g01940 605 FunFam Pectinesterase 288 603 - -
Phac3g01940 605 FunFam Pectinesterase 83 238 - -
Phac3g01940 605 Gene3D - 288 603 IPR012334 -
Phac3g01940 605 Pfam Pectinesterase 294 589 IPR000070 GO:0030599|GO:0042545
Phac3g01940 605 ProSitePatterns Pectinesterase signature 2. 438 447 IPR033131 -
Phac3g01940 605 SMART PMEI_2 82 233 IPR006501 GO:0004857
Phac3g01940 605 Pfam Plant invertase/pectin methylesterase inhibitor 86 233 IPR006501 GO:0004857
Phac3g01940 605 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 85 236 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g01940 Phac-Chr3 22169830 22172325 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g01940 1 605 Carbohydrate Esterase AT2G26450 48.649 0.0 603
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g01940 - - vun:114177564 1007.28