Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g01939 ATGGCATCAAGGAAAGCTTTTAACCAATGCTTGGTTTTGCTAATCTTGCTGATGAATTGTTTTACTTTTCTGGTTCAATGTGGTAGGCCACACAACACAGAAGGAGAGGATTTGGTCACAGCAACCTGCAAACACACCCTTCATTTTCAAGTATGCAATTCTTCCCTAAGATCAGTCCCTAGTAGTAGCAAGACATCAGATCTCAAAGTACTTGCCGAGATAGCACTGAATCTCAGCACAACATATGCTGCAGACACTTTGTCCTGTGTTCATGAACTGCAGTCGAATTCTTCCGCTGCCATTAACATTTACGTGTCCCGTTGCTTAAGGGACTGCGAAGAGGAAATCTCAGAAGCCATAGAGAACTTGCAGGACTCAAAAGAAGCACTTGCCAATGGAGATTGTGACAGAGTGGATACATTGGTTTCTGCTGCTATGTCTGATGCTGAGACATGTGAGGATGGCTTCAAGGACATGCCAAGTGAGGACAATTATTCCACTTCTCCTCTGACTGAGCGTAACCGTTACTTCTCTAAACTATGTAGTAATTATCTTGCTATTACAAAATTACTAGTTTGA 579 0.4231 MASRKAFNQCLVLLILLMNCFTFLVQCGRPHNTEGEDLVTATCKHTLHFQVCNSSLRSVPSSSKTSDLKVLAEIALNLSTTYAADTLSCVHELQSNSSAAINIYVSRCLRDCEEEISEAIENLQDSKEALANGDCDRVDTLVSAAMSDAETCEDGFKDMPSEDNYSTSPLTERNRYFSKLCSNYLAITKLLV* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g01939 192 Coils Coil 109 129 - -
Phac3g01939 192 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 37 191 IPR035513 -
Phac3g01939 192 Gene3D Invertase/pectin methylesterase inhibitor family protein 34 192 IPR035513 -
Phac3g01939 192 CDD PMEI-like_1 38 191 - -
Phac3g01939 192 FunFam Invertase/pectin methylesterase inhibitor family protein 34 192 - -
Phac3g01939 192 Pfam Plant invertase/pectin methylesterase inhibitor 37 187 IPR006501 GO:0004857
Phac3g01939 192 NCBIfam pectinesterase inhibitor domain 9 191 IPR006501 GO:0004857
Phac3g01939 192 SMART PMEI_2 34 187 IPR006501 GO:0004857
Phac3g01939 192 PANTHER PECTINESTERASE INHIBITOR-LIKE 14 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g01939 Phac-Chr3 22167695 22168363 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g01939 38 189 Carbohydrate Esterase AT1G53830 26.875 2.50e-08 51.2