Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g01905 ATGAAGGCTCCATCCAATGGTTTCTTGCCTAATTCTGGGGAAGGGGAAAGGAAGACGATAAATTCAGAGTTATGGCATGCTTGTGCTGGACCTTTGGTGTCTTTGCCTCCTGTTGGAAGTCTTGTGGTTTACTTCCCCCAAGGACACAGTGAACAAGTTGCAGCTTCCATGCAAAAGGAGACTGACTTCATTCCCAGTTACCCTAACCTTCCCTCTAAGTTGATTTGCATGCTTCACAATGTTGCCTTGCATGCTGATCCTGAAACTGACGAGGTCTATGCACAGATGACTCTTCAACCTGTAAACAAATATGAGAAAGAAGCAATACTGGCATCAGACATGGGTCTCAAACAATGCCGTCAACCTACTGAGTTCTTTTGCAAAACACTTACAGCTAGTGACACTAGCACTCATGGTGGATTTTCTGTGCCACGTAGAGCAGCTGAGAAAATATTTCCAACCTTGGATTATTCAATGCAACCTCCAGCTCAGGAGCTTGTAGCTAAGGATTTGCACGATAATACATGGCCATTCAGACATATTTATCGAGGACAACCAAAGAGGCATCTATTGACTACTGGTTGGAGTGTATTTGTCAGCACAAAAAGACTGTTTGCAGGAGATTCTGTTCTTTTTATCAGAGATGAAATGAAGCATCTTCTTTTAGGTATAAGGCGTGCTAACAGACAGCAATCAGCACTCTCTTCATCAGTAATATCCAGTGACAGCATGCATATTGGCATTCTTGCTGCTGCTGCTCATGCTGCTGCAAACAACAGTCCATTTACTATATTTTACAATCCAAGGGCTAGCCCCTCTGAATTTGTTGTTCCACTGGCCAAGTATAACAAAGCCATGTACACTCAAGTTTCTCTTGGAATGAGATTTAGAATGATGTTTGAAACTGAGGAGTCTGGAGTACGCAGATATATGGGAACAATCACTGGGATCAGTGACTTGGATCCTGCCCGATGGAAAAACTCACAATGGCGCAATATTCAGGTTGGATGGGATGAATCAACAGCTGGCGAGCGCCCCAGTAGAGTTTCAATTTGGGAAGTTGAACCTGTAGTTACTCCTTTTTATATTTGTCCTCCTCCATTTTTTAGGCCTAAGTTCCCCAGGCAACCAGGAATGCCAGATGACGAGTCAGATATGGAAAATACTTTCAAGAGAGGTATGCCCTGGCTTGGAGATGACTTTGGCATGAAGGATGCCTCAAGTTCAATCTTTCCTGGTTTTAGTTTAGTGCAGTGGATGAACATGCAACCGAATAATCAACTCTCAGCGGCTCAATCAGGATGTTTCCCATCCATGCTTCCATCTAATACCCTTCAGGGTAACCTTGCCACCGAAGATCCATCCAAGTTATTGAGCTTTCAAGCTCCTGTTCTCTCTTCCCCAAGTCTTCAATTAAACAAACCCAATCTACCAAATCAAATCAACCAGTTGCAACAGTCCCCAGTGTCATGGCCTCAGCAGCAGCAACAGTTGCAGCAACAACAGCTGCAACAGCAACAACTGCAGCAGCAACAGCAACAGTTGCAGCAACAACAACAACAACAGCTTCAGCAACAACAGCAGCTTCAGCAACAACAGCAGCAACAACAACAGCAGCAGCAATTACAGTCATTGTTGCAAATACCAATGAACCATCTCCAGCAACAGAGGCAACAGCAGCTGACTGAGCCACAAAACCTGTCATTGCTGCAGCAACTGCCTCAACAGCTAGGACAGCAGCCCCAGAAACAGCAACAGCCAAGTCAACATACACTTATGCATAATGGGGTAGTTGCTTCTAACCAGATTACAAGTCAGTTTGTACAACCACCGATGGCATATGGTCAGCTTCAGCAACAACAATTACTCTCAGGAGGAATTCAACCCCAGCAAGGTATCCAGTCAGCTAGTAAGAATACATTCCCATTGACATCCTTATCACATGACTCACAATTTCAGCAACAGATAGATCAGCAAGCTAACCTCTTACTAAGGCAACAACAACAACAGACACAATTGCAACAATCTCCACTGCAGTTGTTGCAACATAACATGCCACAGATAGCATCACAACAACAACTGCCTGCCACTCAAATGTTACAGCAAAATCCCTCAGAGCAACAACTCCACCTACAGTTGCTACAGAAATTGCAGCACCAACAACAACAGCAACTTCTTTCTACGTCCACCCCACTGATGCAGTCTCAGCTTCTACCACAACAAAATACTCACCAACAAAACCAGCAATTACCACAGGCCCCACCACCTGTATCACATCATCAGCCTCAACAGGTTGCCAATAATGCATTGTCAACAGAGAAGCTTCTTAACAGCAACAACTTCTCTTCTTCATCTCTTATGCAATCACAACAGATTCCTATGAACCAATCCCAGAATACACAGAAATCACTTACCATAACCAGAGCTCCCTCTACACTAACAGATGGAGATGCCCCATCATGCTCAACTTCTCCATCTACTAATAACTGCCAGGTGTCTCCTCCAAACCTCCTGAAAAGAAATCAGCAACTACCAGCTACATTAGGGGGAAGTTTGATAGTTGAGCCCACTAGTAATCTGATACAGGAGCTTCACAGTAAGCCTGACATGCAGAACAAACATGACTTGCTCAATCTAAAAGGACCTGACCAGTTGAAGTATAAAGGGACAATCACTGATCAGCTGGAAGCTTCTTCTTCTGGAACATCTTACTGCCTTGATCCTGGTAATGTCCAACAGAACTTGCCACTTTCGAACTTCTGCATGGAAGGGGATGCCCAATCACACCCAAGAAACAGTTTACCATTTGACACTAATCTGGATGATCTAACCCCTGATACTATGCTTTTAAGGGGATATGACTCTTCAAAAGATCTTCAAAATTTGTTGTCTAACTATGGTGGTGCTCCTAGAGACATTGAAACTGAGCTGTCAACTGCTGACATCAGCTCACAGTCCTTTGGAGTGCCAAACATGCCTTTCAAGCCTGGTTGCTCAAGTGACGTTGTCATCAATGAAACTGGTGTTCTGAATAATAATGGCTTGCGGGCCAACCAACCACCACCTCCACGAATGCGGACATATACTAAGGTTCAAAAGCGTGGCTCTGTTGGAAGATGTATTGATGTTACCCGTTACAGGGGATATGATGAACTTCGGCACGATTTGGCTAAAATGTTTGGGATTGAAGGGCAGCTAGATCCTCAAAGGACTGACTGGAAATTAGTATATGTGGATCATGAAAATGACATCCTTCTTGTTGGTGATGACCCTTGGGATGAATTCGTAAGCTGTGTGCAGAGCATAAAGATATTGTCACATTCAGAAGTGCAACAAATGAGCTTGGATGGGGATTTGGGTGGTACTGTTCCAATCCCTAATCAAGCTTGCAGTGGTACAGACAGTGGCAATGCATGGAGAGGACAATATGAAGATAACTCAGCTGCCTCTTTTAACAGGTAA 3462 0.4405 MKAPSNGFLPNSGEGERKTINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKETDFIPSYPNLPSKLICMLHNVALHADPETDEVYAQMTLQPVNKYEKEAILASDMGLKQCRQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPTLDYSMQPPAQELVAKDLHDNTWPFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDEMKHLLLGIRRANRQQSALSSSVISSDSMHIGILAAAAHAAANNSPFTIFYNPRASPSEFVVPLAKYNKAMYTQVSLGMRFRMMFETEESGVRRYMGTITGISDLDPARWKNSQWRNIQVGWDESTAGERPSRVSIWEVEPVVTPFYICPPPFFRPKFPRQPGMPDDESDMENTFKRGMPWLGDDFGMKDASSSIFPGFSLVQWMNMQPNNQLSAAQSGCFPSMLPSNTLQGNLATEDPSKLLSFQAPVLSSPSLQLNKPNLPNQINQLQQSPVSWPQQQQQLQQQQLQQQQLQQQQQQLQQQQQQQLQQQQQLQQQQQQQQQQQQLQSLLQIPMNHLQQQRQQQLTEPQNLSLLQQLPQQLGQQPQKQQQPSQHTLMHNGVVASNQITSQFVQPPMAYGQLQQQQLLSGGIQPQQGIQSASKNTFPLTSLSHDSQFQQQIDQQANLLLRQQQQQTQLQQSPLQLLQHNMPQIASQQQLPATQMLQQNPSEQQLHLQLLQKLQHQQQQQLLSTSTPLMQSQLLPQQNTHQQNQQLPQAPPPVSHHQPQQVANNALSTEKLLNSNNFSSSSLMQSQQIPMNQSQNTQKSLTITRAPSTLTDGDAPSCSTSPSTNNCQVSPPNLLKRNQQLPATLGGSLIVEPTSNLIQELHSKPDMQNKHDLLNLKGPDQLKYKGTITDQLEASSSGTSYCLDPGNVQQNLPLSNFCMEGDAQSHPRNSLPFDTNLDDLTPDTMLLRGYDSSKDLQNLLSNYGGAPRDIETELSTADISSQSFGVPNMPFKPGCSSDVVINETGVLNNNGLRANQPPPPRMRTYTKVQKRGSVGRCIDVTRYRGYDELRHDLAKMFGIEGQLDPQRTDWKLVYVDHENDILLVGDDPWDEFVSCVQSIKILSHSEVQQMSLDGDLGGTVPIPNQACSGTDSGNAWRGQYEDNSAASFNR* 1154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g01905 1153 MobiDBLite consensus disorder prediction 1130 1153 - -
Phac3g01905 1153 FunFam Auxin response factor 289 361 - -
Phac3g01905 1153 Gene3D - 1023 1114 - -
Phac3g01905 1153 Gene3D - 124 227 IPR015300 -
Phac3g01905 1153 Pfam AUX/IAA family 1025 1112 IPR033389 -
Phac3g01905 1153 Gene3D - 289 360 - -
Phac3g01905 1153 SUPERFAMILY DNA-binding pseudobarrel domain 117 255 IPR015300 -
Phac3g01905 1153 CDD B3_DNA 125 226 IPR003340 GO:0003677
Phac3g01905 1153 MobiDBLite consensus disorder prediction 810 837 - -
Phac3g01905 1153 FunFam Auxin response factor 124 228 - -
Phac3g01905 1153 MobiDBLite consensus disorder prediction 740 765 - -
Phac3g01905 1153 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 17 580 IPR044835 GO:0003677|GO:0006355|GO:0009725
Phac3g01905 1153 SMART B3_2 126 228 IPR003340 GO:0003677
Phac3g01905 1153 Coils Coil 498 543 - -
Phac3g01905 1153 Pfam Auxin response factor 252 334 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Phac3g01905 1153 MobiDBLite consensus disorder prediction 783 802 - -
Phac3g01905 1153 SUPERFAMILY CAD & PB1 domains 1039 1104 - -
Phac3g01905 1153 ProSiteProfiles B3 DNA-binding domain profile. 126 228 IPR003340 GO:0003677
Phac3g01905 1153 FunFam Auxin response factor 1022 1114 - -
Phac3g01905 1153 ProSiteProfiles PB1 domain profile. 1026 1109 IPR000270 GO:0005515
Phac3g01905 1153 Pfam B3 DNA binding domain 126 227 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g01905 Phac-Chr3 21629358 21637449 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g01905 1 490 B3 DNA Binding Superfamily AT5G20730 79.960 0.0 788
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Phac3g01905 AUX_IAA 5.1e-09 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g01905 K14486 - gmx:100816054 1734.54