Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g01898 ATGTCGACCTCGTCGGAGTATTCAGGATTTTCCGGCAACCATACGGCGACTTCTCCGGCGGAGAAGTCCACGTTCTCTCAGACTTGCAGTCTATTGAGCCAATACATCAAGGAAAAGGGTACCTTCGGAGACCTTACCCTCGGAATGACATGCACCGTCGAAGCAAACGCTTCTCCTTCTGAAACATCGTGTCACTCTGCAACAACCATGGAGTTGTTTCCCACCATTTTGACACAACGGAACCCTTCTGCTGCTGTGGATTTCCTCTCTCCCGCGCGTGCATATCCTCACTACTCAGAGCTTCCAACTGTGCTTAATAAATCAAGTGGTTTCATGCCTGTGGAGAAGGAGCCTAAAGCTGCTCAGATGACAATCTTTTATGCTGGACAAGTGGTTGTGTTTAATGATTTTCCCCCTGAAAAAATGGAGGAGATAGTGTCACTGGCCAGGAAGGGAATGTCCCAAAGCCCAAACTACCATGCATATGCTCACACTAGAAACCAGCAAGGAAATCATGCTTCCTTTGTTTCTAATGTCCCCCTTCAACCATTCTCCATGCCAATTGTTCGTGGTCTTCCAATTGCGAGGAAAGTTTCACTTCATCGTTTTTTCGAGAAGAGGAAGCATAGAATTTCTGCCAATGCGCCATATCAAATAAACAATCCCAACTCTGCTCCAAATAAACACGCCGCAGAATCCACCCCATGGCTTGGATTTGGTGTTCAATCAAAACAAATCTGA 741 0.4642 MSTSSEYSGFSGNHTATSPAEKSTFSQTCSLLSQYIKEKGTFGDLTLGMTCTVEANASPSETSCHSATTMELFPTILTQRNPSAAVDFLSPARAYPHYSELPTVLNKSSGFMPVEKEPKAAQMTIFYAGQVVVFNDFPPEKMEEIVSLARKGMSQSPNYHAYAHTRNQQGNHASFVSNVPLQPFSMPIVRGLPIARKVSLHRFFEKRKHRISANAPYQINNPNSAPNKHAAESTPWLGFGVQSKQI* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g01898 246 SMART tify_2 116 151 IPR010399 -
Phac3g01898 246 MobiDBLite consensus disorder prediction 1 20 - -
Phac3g01898 246 Pfam Jas motif 193 218 IPR018467 -
Phac3g01898 246 ProSiteProfiles Tify domain profile. 116 151 IPR010399 -
Phac3g01898 246 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 18 230 IPR040390 -
Phac3g01898 246 Pfam tify domain 117 149 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g01898 Phac-Chr3 21539645 21541926 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g01898 1 242 Tify Gene Family AT1G19180 39.535 6.15e-47 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Phac3g01898 tify 2.6e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g01898 K13464 - gmx:100802800 340.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac3g01898 3 21539645 21541926 Phac3g01898 3 21539645 21541926 ECH