Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g01897 ATGTCGACCTCGTCGGAGTATTCAGGATTTTCCGGCAACCATACGGCGACTTCTCCGGCGGAGAAGTCCACGTTCTCTCAGACTTGCAGTCTATTGAGCCAATACATCAAGGAAAAGGGTACCTTCGGAGACCTTACCCTCGGAATGACATGCACCGTCGAAGCAAACGCTTCTCCTTCTGAAACATCGTGTCACTCTGCAACAACCATGGAGTTGTTTCCCACCATTTTGACACAACGGAACCCTTCTGCTGCTGTGGATTTCCTCTCTCCCGCGCGTGCATATCCTCACTACTCAGAGCTTCCAACTGTGCTTAATAAATCAAGTGGTTTCATGCCTGTGGAGAAGGAGCCTAAAGCTGCTCAGATGACAATCTTTTATGCTGGACAAGTGGTTGTGTTTAATGATTTTCCCCCTGAAAAAATGGAGGAGATAGTGTCACTGGCCAGGAAGGGAATGTCCCAAAGCCCAAACTACCATGCATATGCTCACACTAGAAACCAGCAAGGAAATCATGCTTCCTTTGTTTCTAATGTCCCCCTTCAACCATTCTCCATGCCAATTGTTCGTGGTCTTCCAATTGCGAGGAAAGTTTCACTTCATCGTTTTTTCGAGAAGAGGAAGCATAGGTAA 633 0.4708 MSTSSEYSGFSGNHTATSPAEKSTFSQTCSLLSQYIKEKGTFGDLTLGMTCTVEANASPSETSCHSATTMELFPTILTQRNPSAAVDFLSPARAYPHYSELPTVLNKSSGFMPVEKEPKAAQMTIFYAGQVVVFNDFPPEKMEEIVSLARKGMSQSPNYHAYAHTRNQQGNHASFVSNVPLQPFSMPIVRGLPIARKVSLHRFFEKRKHR* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g01897 210 Pfam Jas motif 193 210 IPR018467 -
Phac3g01897 210 SMART tify_2 116 151 IPR010399 -
Phac3g01897 210 MobiDBLite consensus disorder prediction 1 20 - -
Phac3g01897 210 ProSiteProfiles Tify domain profile. 116 151 IPR010399 -
Phac3g01897 210 Pfam tify domain 117 149 IPR010399 -
Phac3g01897 210 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 18 210 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g01897 Phac-Chr3 21539645 21541926 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g01897 1 210 Tify Gene Family AT1G19180 40.889 1.31e-39 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Phac3g01897 tify 2e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g01897 K13464 - gmx:100802800 298.516