Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g01891 ATGGCCGCTGTTCACCTCTTCTTCTTCCTCCTCCTCCTCTCACTCCTCCCTCTTTCCCTCCCCCTCACTGATAACCAAGCTCTCCTCGCCCTCAAAAAATCCTTCTCCAACCCCCAAACCCTCTCCTCCTGGATCCCCGACCAGAACCCTTGCTCCGCCCGCTGGGTCGGCGTCATCTGCCTCAATAACGGCATCAGCAGCATCCATCTCACCGACCTCTCCCTCTCCGGCTCCATCGACATCGAAGCCCTCTCCCATATCCCCTCTCTTCGCTCCATCAGCTTCGTCAACAACTCCTTCTCCGGTCCCATCCCTCCCTTCAACAAACTCGGAGTCCTCAAGGCCCTCTACTTGACCAACAACCAGTTCTCTGGCCCCATCCCCTCCGACTTCTTCTCCCAGTTAGCCTCCTTGAAGAAAATATGGCTCTCCTACAACAAATTCTCTGGCCCCATACCCGAATCCTTAACCAACCTCCGTTTCTTATCCGAGCTCCATCTCGAAAACAACCAGTTCTCCGGCCCCGTCCCCGACCTCAAACAGGACATCAAATCCCTCGACATGTCCAACAACAACCTCCAAGGCCAAATCCCCTCCTCCATGTCGCGCTTCGACCCCAAATCCTTCTCCGAAAACAAAGAACTCTGCGGGAAGCCACTGGCTAAAGAGTGCGACACCGAGCCCCAGGCCACTGAAAGCACTGGTTGGGGATTGAAGGTGGTTATTCTCATCTTCATTGCCGCTGTTCTCGCAGGGGCTTTTGTCATGATGCGATCCAAGCGTCAACGCGACGATGACTTCAGCGTGATGAGCAGGGATAACGCGGAGGAGGTGGTGCAGGTCCACGTGCCAAGCACCAACCACAGCAGGGGACCCTCCGAGGGAAGCAAGAAGGAGTCTTCCACGACATCGAAGAAAGGGACGTCGCGGAGTATTGGCGACCTCGTGATGGTTAACGATGAGAGGGGCACATTTGGCTTGCCCGATTTGATGAAGGCTGCGGCGGAGGTTCTCGGAAACGGTGGGCTGGGTTCGGCGTACAAAGCCGCCATGGCTAGTGGGTTGTCTGTGGTGGTAAAGCGGATGCGAGAGATGAATAAAGTGAGCAGAGACATCTTTGACGCCGAGATGAGACGCTTTGGGAGACTCAGAAACCCTAACATCTTGACCCCTCTCGCTTACCATTACCGCAAGGAGGAAAAGCTGTTCGTCACAGAATACATGCCCAAAGGAAGCTTGCTATACGTCTTGCACGGTGACAGAGGATCGAATCATTCGGACCTGAACTGGCCAATCCGTTTGAAAATTGTGAAGGGAATAGCACGAGGGTTAGGGTTTCTATATAAAGAATTTCCTAACGAAGACCTGCCACATGGAAACTTGAAATCCAGCAATGTTCTGCTAGCTGAAAATTACGAGCCTCTCCTGGGCGATTTCGCCTTTCATCCACTCATCAACCACAACTACGCCGTACAGACAATGTTTGCCTACAAAACTCCGGATTACGTATCATACCAGCGTGTTACACAGAAAACCGACGTTTATTGCCTCGGAATCATCGTTCTTGAGATCATCACCGGGAAATTCCCTTCTCAGTATCACAGTAATGGGAAGGGTGGCACTGACGTAGTGCAGTGGGTGTTCACTGCAATCTCTGACAGAAGAGAGGCCGAGTTGATTGATCCAGAGTTGAAGAGCAGTCACTCTAACTCCCTCAATCAAATGCTGCAACTTCTCCAAATAGGGGCTGCTTGCACGGAGAGCAACCCCGACCAACGACTTAACATGAAGGAAGCCATTAGGAGGATAGAGGAGGTTCAGGTTTAA 1827 0.5249 MAAVHLFFFLLLLSLLPLSLPLTDNQALLALKKSFSNPQTLSSWIPDQNPCSARWVGVICLNNGISSIHLTDLSLSGSIDIEALSHIPSLRSISFVNNSFSGPIPPFNKLGVLKALYLTNNQFSGPIPSDFFSQLASLKKIWLSYNKFSGPIPESLTNLRFLSELHLENNQFSGPVPDLKQDIKSLDMSNNNLQGQIPSSMSRFDPKSFSENKELCGKPLAKECDTEPQATESTGWGLKVVILIFIAAVLAGAFVMMRSKRQRDDDFSVMSRDNAEEVVQVHVPSTNHSRGPSEGSKKESSTTSKKGTSRSIGDLVMVNDERGTFGLPDLMKAAAEVLGNGGLGSAYKAAMASGLSVVVKRMREMNKVSRDIFDAEMRRFGRLRNPNILTPLAYHYRKEEKLFVTEYMPKGSLLYVLHGDRGSNHSDLNWPIRLKIVKGIARGLGFLYKEFPNEDLPHGNLKSSNVLLAENYEPLLGDFAFHPLINHNYAVQTMFAYKTPDYVSYQRVTQKTDVYCLGIIVLEIITGKFPSQYHSNGKGGTDVVQWVFTAISDRREAELIDPELKSSHSNSLNQMLQLLQIGAACTESNPDQRLNMKEAIRRIEEVQV* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g01891 608 Gene3D Phosphorylase Kinase; domain 1 297 407 - -
Phac3g01891 608 SUPERFAMILY L domain-like 23 204 - -
Phac3g01891 608 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 9 607 IPR046959 -
Phac3g01891 608 Pfam Leucine rich repeat N-terminal domain 23 60 IPR013210 -
Phac3g01891 608 Gene3D Ribonuclease Inhibitor 183 226 IPR032675 -
Phac3g01891 608 FunFam Nuclear pore complex protein NUP107 22 178 - -
Phac3g01891 608 ProSiteProfiles Protein kinase domain profile. 332 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g01891 608 MobiDBLite consensus disorder prediction 281 313 - -
Phac3g01891 608 SUPERFAMILY Protein kinase-like (PK-like) 336 603 IPR011009 -
Phac3g01891 608 Gene3D Ribonuclease Inhibitor 22 182 IPR032675 -
Phac3g01891 608 Pfam Leucine rich repeat 113 172 IPR001611 GO:0005515
Phac3g01891 608 Pfam Protein kinase domain 336 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g01891 608 Gene3D Transferase(Phosphotransferase) domain 1 408 608 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g01891 Phac-Chr3 21492008 21494913 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g01891 2 608 Receptor kinase-like Gene Family AT3G42880 51.334 0.0 634
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Phac3g01891 Pkinase 1.3e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g01891 - - vum:124828555 1039.64