Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g01886 ATGGCGAATCATGATGATTTTACGTATGATGTTTTTATGAGTTTCAAGGGCCTAAACGGTACTCGCTACGCATTCACCGATCATCTCTACCGAGCTTTGCTCCGTCACGGAATCAACACCTTCAGAGACGATCAGAGTCTCCGGAGCGGGGACGAAATCCGTCCTGCTCTTCTTCAGGCAATCGAAGCTTCTAGAATCTCTTTGGTCGTGCTCTGTCAAAACTATGCATCTTCCTCTTGGTGTCTTGACGAACTGGCCAAGATCATTCACTGTTACGAAAACAAAGGAAAACATGTCGTAGCAATTTTTTATTTGGTGGAACCTTCGGATGTACGGTACCAGAAAAACAGTTACGCAACTGCCATGAGTAAACATGAAAACAGATATGGAAAAGAGTCGGAGAAGGTTAAAGCATGGCGATCAGCTTTGTCCAGAGTTTGCGACCTAACCGGAATACACTACAGGAACCATATGTATGAAACCGAGGTTATTGAGAAGATCGTGAAAGACACCTCAGCTAAACTACCTCCCATGCCTTTACAAATCAAGCACCTAGTTGGATTTGATTCTCGTTTTGAACGGGTGAAATCTCTAATAGATGTTGAATCTAATGATGCCGTTTGCATAATGGGGATCTATGGGGTTGGCGGAATTGGAAAAACCACATTTGCTGTGGATCTGTATAACAGGATTAGGCATCATTTTGAAGCTGCAAGTTTTCTTGCTAATGTCAGAGAAAAATCAAATAAAAGCATTAAAGGCCTGGAAGATCTCCAAAGGACACTTCTGTCTGAGATGGGTGAAGAGACAGAAACCATTATTGGCAGTACATTTAAAGGAAGTTCTGAAATAAAGTGCAGGCTTGGACGTAAAAGAGTTCTTCTGGTTGTGGATGATGTTGATTCTGTAAAGCAATTGGAAGCATTAGCTGGAGGATATGATTGGTTTGGTCCTGGTAGCAGGATCATTATAACAACAAGAGATAAAGATGTTCTACATAAGCATGATGTTGAAATTAAAAGATATGAAATGGAAGAGCTAAATTATCATGAATCCCTTGAACTCTTTTGTTGGTATGCCTTTAATAGGAGCAGACCAGCAGAAAACTTTGCAAGCATCTCTACTCGTGCAGTAAGATACGCAAAGGGTATTCCGTTGGCACTAAGAGTAATAGGCTCCAATTTGAAGGGTAGGGGTCCTGAAGAATGGGAGACTGAATTACAGAAATATAGGAAGGTTCCAGATGTGGAGATTCAAGGTGTACTGGAAATAAGTTACACAAGCCTATCTAACTTGGACCAGAAAATTTTCCTGGACATTGCATGTTTCTTCAAAGGGGAAAGGTGGGATTATGTTAAAAGGATACTAGATGCTTGTGATTTCCACCCGGATATACAAGTACTTGTTAGTAAAGGTCTCTTAACTATTGATGAAAACGGTTGCCTGGAAATGCATGATCTAATACAAGACATGGGTAGAGAGATTGTTCGGAAGGAATCGCCATCAAACCCTGGTTACCGCAGCAGATTATGGTCTCTGAAAGAAGTTCATGAAGTACTTAAAGAAAATTCAGGAAGTGATACAGTTGAAGGAATAATGCTTCATCCCCCAAAACAAGAAAAAATAGATGATTGGACTGTGACAGCCTTCAAGAAGATGAGGAACCTCAGAATTTTGATTGTTCGCAATACAATATTTTCGTCTGGTCCTAGTTATCTGCCAAATAGTTTACGGCTAATCGATTGGAAGGGGTACCCATCAAAGTGTTTTCCGCCAGACTTTTATCCCCACAGAATTGTTGACTTCAAGTTACCTCATAGTTCTCTGATATTTAAAAAACCATTTCAGGTACATGCATTTGCTTTCTCTTTCTATCCCCCCTAA 1884 0.4055 MANHDDFTYDVFMSFKGLNGTRYAFTDHLYRALLRHGINTFRDDQSLRSGDEIRPALLQAIEASRISLVVLCQNYASSSWCLDELAKIIHCYENKGKHVVAIFYLVEPSDVRYQKNSYATAMSKHENRYGKESEKVKAWRSALSRVCDLTGIHYRNHMYETEVIEKIVKDTSAKLPPMPLQIKHLVGFDSRFERVKSLIDVESNDAVCIMGIYGVGGIGKTTFAVDLYNRIRHHFEAASFLANVREKSNKSIKGLEDLQRTLLSEMGEETETIIGSTFKGSSEIKCRLGRKRVLLVVDDVDSVKQLEALAGGYDWFGPGSRIIITTRDKDVLHKHDVEIKRYEMEELNYHESLELFCWYAFNRSRPAENFASISTRAVRYAKGIPLALRVIGSNLKGRGPEEWETELQKYRKVPDVEIQGVLEISYTSLSNLDQKIFLDIACFFKGERWDYVKRILDACDFHPDIQVLVSKGLLTIDENGCLEMHDLIQDMGREIVRKESPSNPGYRSRLWSLKEVHEVLKENSGSDTVEGIMLHPPKQEKIDDWTVTAFKKMRNLRILIVRNTIFSSGPSYLPNSLRLIDWKGYPSKCFPPDFYPHRIVDFKLPHSSLIFKKPFQVHAFAFSFYPP* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g01886 627 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 151 IPR035897 -
Phac3g01886 627 SUPERFAMILY "Winged helix" DNA-binding domain 417 521 IPR036390 -
Phac3g01886 627 Pfam TIR domain 9 181 IPR000157 GO:0007165
Phac3g01886 627 Gene3D - 175 342 IPR027417 -
Phac3g01886 627 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 178 440 IPR027417 -
Phac3g01886 627 Gene3D - 7 174 IPR035897 -
Phac3g01886 627 PRINTS Disease resistance protein signature 381 395 - -
Phac3g01886 627 PRINTS Disease resistance protein signature 287 301 - -
Phac3g01886 627 PRINTS Disease resistance protein signature 209 224 - -
Phac3g01886 627 Gene3D - 346 430 IPR042197 -
Phac3g01886 627 SMART till_3 8 149 IPR000157 GO:0007165
Phac3g01886 627 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9 609 IPR044974 GO:0006952
Phac3g01886 627 FunFam Disease resistance protein (TIR-NBS-LRR class) 5 176 - -
Phac3g01886 627 Pfam NB-ARC domain 193 410 IPR002182 GO:0043531
Phac3g01886 627 ProSiteProfiles TIR domain profile. 7 175 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g01886 Phac-Chr3 21465801 21471234 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g01886 9 607 WRKY Transcription Factor Family AT4G12020 30.378 2.42e-72 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g01886 - - vum:124827482 1156.74