Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g01885 ATGGCGAATCATGATGATTTTACGTATGATGTTTTTATGAGTTTCAAGGGCCTAAACGGTACTCGCTACGCATTCACCGATCATCTCTACCGAGCTTTGCTCCGTCACGGAATCAACACCTTCAGAGACGATCAGAGTCTCCGGAGCGGGGACGAAATCCGTCCTGCTCTTCTTCAGGCAATCGAAGCTTCTAGAATCTCTTTGGTCGTGCTCTGTCAAAACTATGCATCTTCCTCTTGGTGTCTTGACGAACTGGCCAAGATCATTCACTGTTACGAAAACAAAGGAAAACATGTCGTAGCAATTTTTTATTTGGTGGAACCTTCGGATGTACGGTACCAGAAAAACAGTTACGCAACTGCCATGAGTAAACATGAAAACAGATATGGAAAAGAGTCGGAGAAGGTTAAAGCATGGCGATCAGCTTTGTCCAGAGTTTGCGACCTAACCGGAATACACTACAGGAACCATATGTATGAAACCGAGGTTATTGAGAAGATCGTGAAAGACACCTCAGCTAAACTACCTCCCATGCCTTTACAAATCAAGCACCTAGTTGGATTTGATTCTCGTTTTGAACGGGTGAAATCTCTAATAGATGTTGAATCTAATGATGCCGTTTGCATAATGGGGATCTATGGGGTTGGCGGAATTGGAAAAACCACATTTGCTGTGGATCTGTATAACAGGATTAGGCATCATTTTGAAGCTGCAAGTTTTCTTGCTAATGTCAGAGAAAAATCAAATAAAAGCATTAAAGGCCTGGAAGATCTCCAAAGGACACTTCTGTCTGAGATGGGTGAAGAGACAGAAACCATTATTGGCAGTACATTTAAAGGAAGTTCTGAAATAAAGTGCAGGCTTGGACGTAAAAGAGTTCTTCTGGTTGTGGATGATGTTGATTCTGTAAAGCAATTGGAAGCATTAGCTGGAGGATATGATTGGTTTGGTCCTGGTAGCAGGATCATTATAACAACAAGAGATAAAGATGTTCTACATAAGCATGATGTTGAAATTAAAAGATATGAAATGGAAGAGCTAAATTATCATGAATCCCTTGAACTCTTTTGTTGGTATGCCTTTAATAGGAGCAGACCAGCAGAAAACTTTGCAAGCATCTCTACTCGTGCAGTAAGATACGCAAAGGGTATTCCGTTGGCACTAAGAGTAATAGGCTCCAATTTGAAGGGTAGGGGTCCTGAAGAATGGGAGACTGAATTACAGAAATATAGGAAGGTTCCAGATGTGGAGATTCAAGGTGTACTGGAAATAAGTTACACAAGCCTATCTAACTTGGACCAGAAAATTTTCCTGGACATTGCATGTTTCTTCAAAGGGGAAAGGTGGGATTATGTTAAAAGGATACTAGATGCTTGTGATTTCCACCCGGATATACAAGTACTTGTTAGTAAAGGTCTCTTAACTATTGATGAAAACGGTTGCCTGGAAATGCATGATCTAATACAAGACATGGGTAGAGAGATTGTTCGGAAGGAATCGCCATCAAACCCTGGTTACCGCAGCAGATTATGGTCTCTGAAAGAAGTTCATGAAGTACTTAAAGAAAATTCAGGAAGTGATACAGTTGAAGGAATAATGCTTCATCCCCCAAAACAAGAAAAAATAGATGATTGGACTGTGACAGCCTTCAAGAAGATGAGGAACCTCAGAATTTTGATTGTTCGCAATACAATATTTTCGTCTGGTCCTAGTTATCTGCCAAATAGTTTACGGCTAATCGATTGGAAGGGGTACCCATCAAAGTGTTTTCCGCCAGACTTTTATCCCCACAGAATTGTTGACTTCAAGTTACCTCATAGTTCTCTGATATTTAAAAAACCATTTCAGAGATTTGAGGATTTGACATTCATCAATCTTTCCCGTTGTCAATTCATAACTCAAATTCCTGACCTGTCTGGAGCTAAAAGCTTGAAGAAGACTTGA 1944 0.4038 MANHDDFTYDVFMSFKGLNGTRYAFTDHLYRALLRHGINTFRDDQSLRSGDEIRPALLQAIEASRISLVVLCQNYASSSWCLDELAKIIHCYENKGKHVVAIFYLVEPSDVRYQKNSYATAMSKHENRYGKESEKVKAWRSALSRVCDLTGIHYRNHMYETEVIEKIVKDTSAKLPPMPLQIKHLVGFDSRFERVKSLIDVESNDAVCIMGIYGVGGIGKTTFAVDLYNRIRHHFEAASFLANVREKSNKSIKGLEDLQRTLLSEMGEETETIIGSTFKGSSEIKCRLGRKRVLLVVDDVDSVKQLEALAGGYDWFGPGSRIIITTRDKDVLHKHDVEIKRYEMEELNYHESLELFCWYAFNRSRPAENFASISTRAVRYAKGIPLALRVIGSNLKGRGPEEWETELQKYRKVPDVEIQGVLEISYTSLSNLDQKIFLDIACFFKGERWDYVKRILDACDFHPDIQVLVSKGLLTIDENGCLEMHDLIQDMGREIVRKESPSNPGYRSRLWSLKEVHEVLKENSGSDTVEGIMLHPPKQEKIDDWTVTAFKKMRNLRILIVRNTIFSSGPSYLPNSLRLIDWKGYPSKCFPPDFYPHRIVDFKLPHSSLIFKKPFQRFEDLTFINLSRCQFITQIPDLSGAKSLKKT* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g01885 647 Pfam NB-ARC domain 193 409 IPR002182 GO:0043531
Phac3g01885 647 Gene3D - 7 174 IPR035897 -
Phac3g01885 647 FunFam Disease resistance protein (TIR-NBS-LRR class) 5 176 - -
Phac3g01885 647 SUPERFAMILY L domain-like 500 645 - -
Phac3g01885 647 Gene3D - 175 342 IPR027417 -
Phac3g01885 647 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 151 IPR035897 -
Phac3g01885 647 Pfam TIR domain 9 181 IPR000157 GO:0007165
Phac3g01885 647 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 178 440 IPR027417 -
Phac3g01885 647 PRINTS Disease resistance protein signature 616 632 - -
Phac3g01885 647 PRINTS Disease resistance protein signature 287 301 - -
Phac3g01885 647 PRINTS Disease resistance protein signature 209 224 - -
Phac3g01885 647 PRINTS Disease resistance protein signature 381 395 - -
Phac3g01885 647 SMART till_3 8 149 IPR000157 GO:0007165
Phac3g01885 647 Gene3D Ribonuclease Inhibitor 538 647 IPR032675 -
Phac3g01885 647 Gene3D - 346 430 IPR042197 -
Phac3g01885 647 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9 646 IPR044974 GO:0006952
Phac3g01885 647 ProSiteProfiles TIR domain profile. 7 175 IPR000157 GO:0007165
Phac3g01885 647 SUPERFAMILY "Winged helix" DNA-binding domain 417 521 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g01885 Phac-Chr3 21465801 21471234 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g01885 9 645 WRKY Transcription Factor Family AT4G12020 30.335 6.31e-75 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g01885 - - vum:124827482 1211.44