Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g01852 ATGATGAATGGAAGGAACAGGTTCCCCTTCACTCCTTCCCAGTGGCAAGAGCTTGAACACCAAGCCCTCATCTACAAATACATGGCTTCAGGTATCTCCATCCCCCCTGACCTTCTCTTCACCATCAAAAGAACCCACTTGGACTCTCCTCTCTCCTCAAGGCTCCTGCCTCACCAGTCTCAACACTTTGGGTGGAACTATTTGCCAATGGGGTTGGGGAGGAAGATAGACCCTGAGCCAGGGAGATGTAGGAGAACAGATGGGAAGAAATGGAGATGCTCAAAGGAGGCATATCCAGATTCAAAGTACTGCGAGAGGCACATGCACAGAGGGAAAAACCGTTCAAGAAAGCCTGTGGAAGTTTTGAAAACAACACCAACGACAGTAACAACAATCACAGATGCCTCAACCCCCACAATCTTATCAATCACCAAAAACAGTCCTGCACTCTCCCCAACCACTCATTCTCTCTCCGTGTCCTCTCATGACACTTACCATCACCACAACCCTCAACATTCCTCCCACTCCTTCCTCTATCATCATCCCTCAAGACCCTCTTCCGGTGTTGCTTTGTCATTTCAAGACAACAGTGCCCCCTTGTTTCTCGACACTGCTTCTTGCTCTCAGAATAACAACACTGACTGCAGGTATGTGTATGGACTGAAAGAGGAAGTGGATGAGCATGCCTTCTTCACGGAACCTTCTGGAACAATGAGAAGCTTCTCTGCTTCCTCAATGGAAGATTCGTGGCAGCTCACACCACTGACCATAAGCTCTTCCTCTTCAAAACAGAGGAGTTGCTCTGGTTTGTCCAACGACAACAACGAGTACTCCTACTTGCAACTTCAGAGCCTCAGTGGCAACAACTCAAAACAGCCACAGCAAGATCAGGGTTGCTACATATCAGGAGCTGGCAGTGATATCAAGTGTGAAACTTTCATGAAACTTGGGAAAGAAGAACCTCAGAAAACTGTTCATCGCTTCTTCGATGAATGGCCCCCCAAGAGCAGAGGATCATGGCTAGATTTGGATGACAAATCATCCACCACCCAGCTTTCAATTTCCATTCCCACTTCTTCTCATGATTTTGCAACTTTCAGTTCAACAACCCAACGAGATGGTTGA 1125 0.4738 MMNGRNRFPFTPSQWQELEHQALIYKYMASGISIPPDLLFTIKRTHLDSPLSSRLLPHQSQHFGWNYLPMGLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEVLKTTPTTVTTITDASTPTILSITKNSPALSPTTHSLSVSSHDTYHHHNPQHSSHSFLYHHPSRPSSGVALSFQDNSAPLFLDTASCSQNNNTDCRYVYGLKEEVDEHAFFTEPSGTMRSFSASSMEDSWQLTPLTISSSSSKQRSCSGLSNDNNEYSYLQLQSLSGNNSKQPQQDQGCYISGAGSDIKCETFMKLGKEEPQKTVHRFFDEWPPKSRGSWLDLDDKSSTTQLSISIPTSSHDFATFSSTTQRDG* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g01852 374 ProSiteProfiles QLQ domain profile. 9 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
Phac3g01852 374 MobiDBLite consensus disorder prediction 143 181 - -
Phac3g01852 374 Pfam WRC 78 120 IPR014977 -
Phac3g01852 374 MobiDBLite consensus disorder prediction 143 160 - -
Phac3g01852 374 ProSiteProfiles WRC domain profile. 77 121 IPR014977 -
Phac3g01852 374 Pfam QLQ 9 42 IPR014978 GO:0005524|GO:0005634|GO:0006355
Phac3g01852 374 SMART QLQ_2 8 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
Phac3g01852 374 PANTHER GROWTH-REGULATING FACTOR 5 8 362 IPR031137 GO:0005634|GO:0006351|GO:0032502
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g01852 Phac-Chr3 21168790 21171543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g01852 7 244 GRF Transcription Factor Family AT3G13960 46.067 2.91e-56 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Phac3g01852 WRC 7.9e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g01852 - - gmx:100783524 664.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac3g01852 3 21168790 21171543 Phac3g01852 3 21168790 21171543 ECH