Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g01846 ATGGGGAGAAGCCCTTGTTGTTCAAAGGAGGGTTTGAATAGAGGTGCTTGGACAGCTCATGAAGACAAAATCCTGAGAGAATACATTAGGGTCCATGGGGAAGGAAGATGGAGAAACCTTCCCAAAAGAGCAGGTTTGAAAAGATGTGGGAAAAGTTGCAGACTTCGATGGCTCAATTATCTCAGACCTGATATTAAGAGAGGCAATATAACCTCAGATGAAGAAGAGCTCATTATCAGACTCCACAAACTCCTGGGAAACAGATGGTCTTTAATAGCAGGGAGGCTTCCAGGACGAACAGACAATGAAATAAAGAATTATTGGAACACCAATTTAGGTAAAAAGGTGAAAGATGGTCACAAAACCTCAACCACTTGTCGTAGACCAAGCAATGAAAACAGCACACAGAATCCAATGTCTCTTCCTAAAGATTCCCACCTGGTGCGTACAAAAGCCACCAAGTGCACTAAGGTGTTTTTCCCTCACCCATCCATGCTGCAACTGCCCACCAAGTCTGAGGAAGAAGAAGAAGTAGAAGAAGAAGAAGAAGAAAGGGTTGTGGATGCTGTAGTAAGTGACCAAATGGAACTCACTACGAACAACAATGGGTTCCTGTCGTTTCCCAATGAAGAAAAAGAGCTCTCAACAGATATGCTCACAGATTTCAACGTGGGGGATATCTGCTTGTCTGATCTTCTCGACTCCGATTTCTCCAATATCTACAACTTCACCTGCACTACCAACGCTGTTCACGACAACAACAACAACGACCAGTTATTCTCTCCTTGTTCCGACCAACCTTATCCCGTGTGCTCTGATGAACTTCTCAAGAACTGGAAGCAAAGCAATTTTGCAGACGAAACCAATGCTTCAAACAACCTTCATTCTTTCATTTCGTTCCTCGAGACCAGCGAGGAAAGAGTAGGACAATCATAA 936 0.4359 MGRSPCCSKEGLNRGAWTAHEDKILREYIRVHGEGRWRNLPKRAGLKRCGKSCRLRWLNYLRPDIKRGNITSDEEELIIRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNTNLGKKVKDGHKTSTTCRRPSNENSTQNPMSLPKDSHLVRTKATKCTKVFFPHPSMLQLPTKSEEEEEVEEEEEERVVDAVVSDQMELTTNNNGFLSFPNEEKELSTDMLTDFNVGDICLSDLLDSDFSNIYNFTCTTNAVHDNNNNDQLFSPCSDQPYPVCSDELLKNWKQSNFADETNASNNLHSFISFLETSEERVGQS* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g01846 311 Gene3D - 70 141 - -
Phac3g01846 311 CDD SANT 16 61 IPR001005 -
Phac3g01846 311 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Phac3g01846 311 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Phac3g01846 311 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 193 - -
Phac3g01846 311 FunFam Transcription factor TT2 70 140 - -
Phac3g01846 311 FunFam MYB-related transcription factor 13 66 - -
Phac3g01846 311 MobiDBLite consensus disorder prediction 126 143 - -
Phac3g01846 311 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Phac3g01846 311 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Phac3g01846 311 Gene3D - 14 66 - -
Phac3g01846 311 MobiDBLite consensus disorder prediction 118 143 - -
Phac3g01846 311 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Phac3g01846 311 CDD SANT 71 112 IPR001005 -
Phac3g01846 311 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Phac3g01846 311 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Phac3g01846 311 SMART sant 66 114 IPR001005 -
Phac3g01846 311 SMART sant 13 63 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g01846 Phac-Chr3 21092978 21094915 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g01846 1 184 MYB Transcription Factor Family AT4G38620 55.851 1.29e-62 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac3g01846 Myb_DNA-binding 1.6e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g01846 K09422 - gmx:100802704 460.299