LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac3g01831	ATGATGACATCAGGCCTACAGAGAAGTGAATTGAAATTTTGTTTATTTTCTATTATGTATAGTCGAGAGATGTTCAATAAATGGCAAGCACAAAGGTGGTGGGCAGACAACTACGACAAAGTTATGGAGCTTTACAATGTTCAAAGGTTTAGCCGCCAAGCATTCCCTCTTCCGACGCCACCAAGATCTGAAGATGAGAGCACAAAGCTTGAATCAGCAGAAGCCAGTCCTGTAACTCCTCCACTGACCAGGGAACGGTTACCTCGTAATATTTACCGTCCAACAGGGATGGGAATGGGATACTCATCCTCAGATTCCTTTGATCATCAGTCAATGCAATCCCGGCATTTCTACGACTCAAATGGTTTGAACTCTACCCCAAAAGTGTCCACTATTAGTGCGGCCAAGACGGAGATATCATCAATGGATGCTTCTATCAGAAGTAGCTCATCCAGAGAGGCTGATCGCTCGGGTGATTTATCAATCAGCAATGCTAGTGATTTGGAGACTGAGTGGGTTGAACAGGATGAACCTGGGGTTTACATTACAATCAGAGCATTGCCAGGTGGCGCAAGGGAGCTCAAACGAGTCAGGTTCAGCCGAGAAAAATTTGGAGAGATGCATGCTAGATTATGGTGGGAGGAGAACCGTGCCAGAATACATGAACAATACTTGTGA	678	0.4499	MMTSGLQRSELKFCLFSIMYSREMFNKWQAQRWWADNYDKVMELYNVQRFSRQAFPLPTPPRSEDESTKLESAEASPVTPPLTRERLPRNIYRPTGMGMGYSSSDSFDHQSMQSRHFYDSNGLNSTPKVSTISAAKTEISSMDASIRSSSSREADRSGDLSISNASDLETEWVEQDEPGVYITIRALPGGARELKRVRFSREKFGEMHARLWWEENRARIHEQYL*	226

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac3g01831	225	ProSiteProfiles	BRX domain profile.	170	225	IPR013591	-
	Phac3g01831	225	ProSiteProfiles	BRX domain profile.	1	46	IPR013591	-
	Phac3g01831	225	MobiDBLite	consensus disorder prediction	56	86	-	-
	Phac3g01831	225	PANTHER	PROTEIN BREVIS RADIX-LIKE 1	18	225	IPR044532	-
	Phac3g01831	225	Pfam	Transcription factor regulating root and shoot growth via Pin3	169	224	IPR013591	-
	Phac3g01831	225	Pfam	Transcription factor regulating root and shoot growth via Pin3	18	45	IPR013591	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac3g01831	Phac-Chr3	20864189	20870563	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac3g01831	15	225	Major Intrinsic Protein MIP	AT1G31880	47.273	1.23e-54	177

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac3g01831	-		-	gmx:100794109	393.275