Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phac3g01814 | ATGGTTTGGTTTCAATGCGAAGATTGTGGAGACAACCTCAAAAAACCCAAGTTGTCGAGTCACTTTCGGACTTGCTCTGCTTACAAATTGTCGTGCATTGACTGTGGGGAAATATTTGGGCGTGACACCGTTCAGGATCACACACAGTGCATTACAGAAGCTGAAAAGTATGGTCCAAAAGGCCAAGGCAAAACTTTGAGTGCTGCAACTGCCACGCCTAACAAGGATAACAAACAAAAGCCTGAAGTTGATATTAATGTGGGGTTATCTCAGCGGCCTCCTTGGTTTTGTAGTCTTTGCAATACAAAAGCTACAAGTAAGCAAACACTTCTTCTCCATGCTGATGGAAAGAAGCACAGGGCAAAGGCGAGAGCATTCCATGCTTCAAAGCAGCAACCAATCCAGGAAGATAAATATGCCACTGATGATGCTAAGGCTGTTTTGGAGACTGGTCCTAATGATGAGGCGAGAGATGACCAAAATGTCGAGCTGCCAAAATTGCAGAAGTCTTTTACAGAAAATGACTCAAAACCAGGGAATGAAATTTCTTCAGCAAAGAAAAAGAGGAAACTTGAAGCGTTGGAGGATGACCTTGTTAAAAAAAGCAATAATAACACTTCAGTTGACATGGGAAATGGAGAAGTAATTCAGGGTGAAAAAGCAACAGGAGAGAGCAATTTGAAGAAAGAAGGGATGTTAAAACATCACTGTACAAGTGCTGTCAAGAATAAAATAAAGTGGAAGAAATTTATCAAATCAGCCTTGAAATCTCATCCTGATGGAGTTTTGAAGATGAAGAAACTTAGAAAAGTTGTCCTCAAAGCACTCCAGGAATCTGGCATTGCAGTGGATGAAACTGAATTGAGTGAGGAGCTTGAGAAGAAGATCAATTCCAGCTCCAGATTTGCAGTCGAGAACAAGTATGTGCGATTGATAGCCAAAGATTGA | 948 | 0.4124 | MVWFQCEDCGDNLKKPKLSSHFRTCSAYKLSCIDCGEIFGRDTVQDHTQCITEAEKYGPKGQGKTLSAATATPNKDNKQKPEVDINVGLSQRPPWFCSLCNTKATSKQTLLLHADGKKHRAKARAFHASKQQPIQEDKYATDDAKAVLETGPNDEARDDQNVELPKLQKSFTENDSKPGNEISSAKKKRKLEALEDDLVKKSNNNTSVDMGNGEVIQGEKATGESNLKKEGMLKHHCTSAVKNKIKWKKFIKSALKSHPDGVLKMKKLRKVVLKALQESGIAVDETELSEELEKKINSSSRFAVENKYVRLIAKD* | 316 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phac3g01814 | 315 | MobiDBLite | consensus disorder prediction | 150 | 164 | - | - | |
| Phac3g01814 | 315 | FunFam | cell growth-regulating nucleolar protein-like | 1 | 50 | - | - | |
| Phac3g01814 | 315 | Pfam | Zinc-finger of C2H2 type | 95 | 119 | - | - | |
| Phac3g01814 | 315 | ProSiteProfiles | Zinc finger C2HC LYAR-type profile. | 1 | 26 | - | - | |
| Phac3g01814 | 315 | MobiDBLite | consensus disorder prediction | 165 | 179 | - | - | |
| Phac3g01814 | 315 | SUPERFAMILY | beta-beta-alpha zinc fingers | 82 | 127 | IPR036236 | - | |
| Phac3g01814 | 315 | Gene3D | - | 1 | 50 | - | - | |
| Phac3g01814 | 315 | MobiDBLite | consensus disorder prediction | 150 | 189 | - | - | |
| Phac3g01814 | 315 | SUPERFAMILY | beta-beta-alpha zinc fingers | 1 | 26 | IPR036236 | - | |
| Phac3g01814 | 315 | MobiDBLite | consensus disorder prediction | 58 | 81 | - | - | |
| Phac3g01814 | 315 | SUPERFAMILY | beta-beta-alpha zinc fingers | 30 | 58 | IPR036236 | - | |
| Phac3g01814 | 315 | FunFam | UBP1-associated proteins 1C | 89 | 132 | - | - | |
| Phac3g01814 | 315 | ProSiteProfiles | Zinc finger C2HC LYAR-type profile. | 27 | 51 | - | - | |
| Phac3g01814 | 315 | Coils | Coil | 184 | 204 | - | - | |
| Phac3g01814 | 315 | Gene3D | Classic Zinc Finger | 71 | 125 | - | - | |
| Phac3g01814 | 315 | SMART | ZnF_U1_5 | 92 | 126 | IPR003604 | GO:0003676|GO:0008270 | |
| Phac3g01814 | 315 | Pfam | LYAR-type C2HC zinc finger | 30 | 57 | IPR014898 | - | |
| Phac3g01814 | 315 | PANTHER | CELL GROWTH-REGULATING NUCLEOLAR PROTEIN LYAR | 1 | 311 | IPR039999 | GO:0003677 |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Phac3g01814 | 52 | 230 | C2H2 Transcription Factor Family | AT2G19380 | 33.889 | 2.46e-19 | 86.7 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Phac3g01814 | K15263 | - | gmx:100790272 | 509.99 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Phac3g01814 | 3 | 20773076 | 20777002 | Phac3g01814 | 3 | 20773076 | 20777002 | ECH |