Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g01806 ATGTCCGCACCACCGTTGCCGAGATCGGTTGCCGTCGCCGTGAGTGGAGGCTCCAGCAAGGGTAGCCGGCGGGCCGTGCAGTGGGCGGTTGATAATCTCGTCCCTCAAGCCGATAGGTTCATCTTAGTTCACGTTATCTCTCCAATCACTTCAATTGCCACACCAAACGCAGACGTGTTTGCAGCTTATGTGGACGATGTGAAGCAAAAATCTGAACAAATCTTCGTTCCGTTCAAGAAACTCTGCGGCTCAAACACAATGGAAACAGTGCTGCTAGAAGATGACAATGTGGCAGAAGCACTTCTTAGCTTTATTTCGGAGTCCGGGGTCCAAACATTAGTGCTGGGTTCTGACTCCTCAAATTTTATAACAAGGAAGCTTAAAGGACCTGGAATACCAACTACCAGCCTAAGATGTGCTCCAGACAGCTGTGATGTGTATGTTGTAGCTAGAGACAGAATTGTTTCGAAGTTGGCCGATTTGTCATCTTCACATTCTCATGAGACTAGCCCAACAAGTTACTTCATGTCTACTAAAGTAAATGAAGTAGACAATGAGGCTGGCATTGGCAGAGAAATGTCGGGAATCAGTTCATCCACAACAGAATCTAAAATCCTAAAGAATTTCAGATTTTTATCATTATCCGAGCATAGTTACATTGGTCTGCAAACATTTAGTCGCAGGGATTCTTTTGAAAATTCTACCAAAAATGATAATCCAGAAAACTGTGGAGATGATATTGAAATGATTAGCCTCCACTCTTTTGATTCCATTGCTTCTGCACAACGTGAACAGTTAGTCATGCAACAACAAGTGGAACGGCTGCAACTGGAGTTGCAAAATACTATCGCCATGTACAAACAGGTTTGTGTGGAGCTGGTTCAAGCTCAAAACCAGGCCCTTTTACTTTCTTCTGAATCTCTTGAAGAAACTAAAAGAGTGAATGCTTCCCTAAAAAGAGAGGAGGTTTTAAGAAAGATTGCTTCTGAAGAGAAAACTAAGTATTTAAAAGTCATGAAGGAACTTGAGGAGGCGAAAAATAAGTTTTCCAAAGAATCATACGAAAGGCAGATGGCTGAACTTGATGTCCTTAAAGAATCAATAGAGAAACAGAGAATTGTTGATAAATTGCTCTCAAACGACAGGAGATACAGAAAGTACACCATGGATGACATCAAGATAGCGACAAAATTCTTTTCTGAGGACTTGATGATTGGTGAAGGAGGATATGGGAAAGTTTACAAGTGTAATCTTGATCACACACCAGTAGCTGTAAAGGTTCTGCATCAGGATGCAATCAACAAGAAAGAGGAGTTTCTAAAAGAGGTTGAGATTCTTAGTCAACTGCATCACCCTAATATGGTTTTGTTAGTTGGAGCCTGTCCTGAGAATGGTTGCCTAGTTTATGAGTACCTGGAAAATGGAAGTCTAGAAGACTATCTTCTCAACAAAAATAGAAAACCACCGCTTCCTTGGTTTTTTCGATTTCGCATAGTTTTTGAAATGGCTTGTGGACTTTCGTTCTTGCATAATTCGAAGCCAGAGCCGATTGTCCATCGAGATATAAAACCTGGCAACATTTTGTTAGACAGAAATTATGTGAGCAAAATTTCTGATGTTGGGCTGGCTAAACTCCTTGCAGAAGTCGTGCCTGACAATATTACAGACTACCGAGAATCAGTCCTTGCCGGTACTCTGCATTACATGGACCCAGAATATCAGAGAACTGGCACTGTTCGACCAAAATCAGATGTATATGCATTTGGAGTTATAACTCTCCAATTAATAACAGGTCGCCATGCACGTGGGCTCATTTTGATTGTTGAAGATGCAATTAGAAATGGCTCCTTCCGTGATTTTTTAGATTCATCAGCTGGAGATTGGCCATTGGATGAGACAGTGGAATTGGCTCAAATTGCTCTTAAATGCACAGCACTTAGATGCAGAGATAGACCAGAACTTGATACTGAAGTTCTTCCACTGCTCGAAAGATTTTCTAATGCGGCAAATGCTAGTGCAAGGATAGGAAGAAATAGTGTAAGTGCACCAAGCCAGTATTATTGTCCAATCCTTCAGGAAATCATGGATGATCCATATATTGCTGCGGATGGGTTCACTTATGAGTACAGAGCAATCAAGGCATGGCTCAGCAAACACAATGTGTCACCCATGACAAAGCTTAAACTTCAGCATTCTGTGTTGACTCCGAACCATACTCTACGTTCTGCCATTCAGGAGTGGAAGTCAGGAGTCACCTTTTGA 2262 0.4178 MSAPPLPRSVAVAVSGGSSKGSRRAVQWAVDNLVPQADRFILVHVISPITSIATPNADVFAAYVDDVKQKSEQIFVPFKKLCGSNTMETVLLEDDNVAEALLSFISESGVQTLVLGSDSSNFITRKLKGPGIPTTSLRCAPDSCDVYVVARDRIVSKLADLSSSHSHETSPTSYFMSTKVNEVDNEAGIGREMSGISSSTTESKILKNFRFLSLSEHSYIGLQTFSRRDSFENSTKNDNPENCGDDIEMISLHSFDSIASAQREQLVMQQQVERLQLELQNTIAMYKQVCVELVQAQNQALLLSSESLEETKRVNASLKREEVLRKIASEEKTKYLKVMKELEEAKNKFSKESYERQMAELDVLKESIEKQRIVDKLLSNDRRYRKYTMDDIKIATKFFSEDLMIGEGGYGKVYKCNLDHTPVAVKVLHQDAINKKEEFLKEVEILSQLHHPNMVLLVGACPENGCLVYEYLENGSLEDYLLNKNRKPPLPWFFRFRIVFEMACGLSFLHNSKPEPIVHRDIKPGNILLDRNYVSKISDVGLAKLLAEVVPDNITDYRESVLAGTLHYMDPEYQRTGTVRPKSDVYAFGVITLQLITGRHARGLILIVEDAIRNGSFRDFLDSSAGDWPLDETVELAQIALKCTALRCRDRPELDTEVLPLLERFSNAANASARIGRNSVSAPSQYYCPILQEIMDDPYIAADGFTYEYRAIKAWLSKHNVSPMTKLKLQHSVLTPNHTLRSAIQEWKSGVTF* 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g01806 753 Pfam U-box domain 683 748 IPR003613 GO:0004842|GO:0016567
Phac3g01806 753 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 682 751 IPR013083 -
Phac3g01806 753 Pfam Protein tyrosine and serine/threonine kinase 404 655 IPR001245 GO:0004672|GO:0006468
Phac3g01806 753 SMART Ubox_2 685 747 IPR003613 GO:0004842|GO:0016567
Phac3g01806 753 Gene3D Transferase(Phosphotransferase) domain 1 472 681 - -
Phac3g01806 753 Coils Coil 325 371 - -
Phac3g01806 753 CDD STK_N 9 151 - -
Phac3g01806 753 CDD RING-Ubox_WDSUB1-like 683 737 - -
Phac3g01806 753 ProSiteProfiles Protein kinase domain profile. 399 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g01806 753 Coils Coil 258 278 - -
Phac3g01806 753 Gene3D HUPs 8 149 IPR014729 -
Phac3g01806 753 SUPERFAMILY RING/U-box 676 748 - -
Phac3g01806 753 Pfam Universal stress protein family 10 127 IPR006016 -
Phac3g01806 753 SUPERFAMILY Protein kinase-like (PK-like) 382 654 IPR011009 -
Phac3g01806 753 PANTHER OS02G0152300 PROTEIN 10 746 - -
Phac3g01806 753 ProSiteProfiles U-box domain profile. 681 753 IPR003613 GO:0004842|GO:0016567
Phac3g01806 753 SMART serkin_6 399 662 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g01806 753 ProSitePatterns Protein kinases ATP-binding region signature. 405 426 IPR017441 GO:0005524
Phac3g01806 753 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 8 130 - -
Phac3g01806 753 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 371 471 - -
Phac3g01806 753 ProSitePatterns Serine/Threonine protein kinases active-site signature. 517 529 IPR008271 GO:0004672|GO:0006468
Phac3g01806 753 Gene3D Phosphorylase Kinase; domain 1 376 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g01806 Phac-Chr3 20678678 20683950 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g01806 1 749 Plant U-box Gene Family AT5G57035 52.375 0.0 796
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Phac3g01806 PK_Tyr_Ser-Thr 1.3e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g01806 - - vun:114178082 1355.89