Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g01773 ATGGCTCCTAGAATCCTTCTTTGCGGCGACGTTTTAGGTCGCCTCAACCAACTCTTTAAGCGCGTCTCTTCGGTGACCAAATCTGCAGGTCCATTCGACGCGCTCTTATGCGTAGGCCAGTTCTTCCCGGACTCACCGGACCAATTGGAAGAGTTCACGGCGTACATTGAAGGTGGATCACAGATTCCGCTTCCGACTTACTTCGTCGGCGATTACGGCGTCGCCGCCCCTAAATTTCTCTTGCAAGCTTCCAAGGACTCCGCCAACCGCGGTTTCATGATGGACGGCTTCAAGGTTTGCCACAACTTGTATTGGTTGAAAGGCGGTGGCAAATTCCCCCTCTTCGGGTTATCCGTGGCCTATTTATCTGGTAGGAAGTCATCCAGTGTTCAACAGTTTGGAACTTACACTGAAGATGATGTTGATGCTTTGCGAGCTATTGCAGAGGAACCTGAAATAATTGATCTGTTCTTGACTAACGAATGGCCAAGTGGCGTCACCAACGGAGCAGCTGCTTCGGACATTCCTGCTGGAGTGTCTGATGCTGTAGGCAGTGATTCAACTATATCGGAGTTAGTACAGGAGATCAAACCACGTTATCACATTGCAGGCACGAAAGGTATATACTATGCCCGTGAACCATATACCAATGTTGATGCTGTGCATATCACCCGTTTCATAGGGCTTGCGTCTGTTGGAAATAGAGATAAACAGAAATTTATTCATGCAATCTCCCCAACACCTGCTTCCACCATGTCTTCAACTGAGATTGCCATGAAAACCACAACTACCACCTTATCACCGTACACATTTGTGGAGAAAATAACTGCTCCAATGGATTCCACAAAGAGATCCAATGATTCTATCTCTGATTCTCAATATTGGAGATATGATGTTTCTCAAAAGCGACAAAAATATGAAACTGGGCAAACTGATAAGATGTGTTTCAAATTTGTTTCGTCTGGATCTTGTCCACATGGAGAGAAGTGCCATTTTCGACATGATATAGATGCAAGGGAGCAGTGTAGGAGAGGTGTTTGCTTTGATTTTTTGAACAAGGGAAAATGCGAAAGGGGCCCAGATTGCAATTTTAAGCACAACTTGCAGGATGAAGGTGACAGACATCCTTCAAGGAGGCCTGGATCTGGCAGATCAAAAGAATGTTGGTTTTGCTTGTCAAGCCCAAATGTGGAGACACATTTAATAGTAAGCATTGGGGAAAATTATTACTTGGCACTGGCTAAAGGTCCACTTGTTGAAGACCACGCATTGATACTACCAGTGGAGCATATGCCTAGTACCTTATCTATGTCTTCTGAATCTGAAATTGAGCTCTCTAGGTTTCAGAGCAGTCTCAAGAGTTACTGCAGGAGCCAAGAGAAGGAAGTGATATTTTTTGAGTGGGCCTCCATCCGTGGCACTCATGCCAATCTTCAGGCCATTCCCATTCCATCTTCCAAAGCAGTTATGGTTGAAAATGTTTTCAATTTAGCTGCACAAAAGTTGGGATTTGAATTTGTGGCCAAGACATTTGATAGCATTTCTGATGGAAGGAAGTTTTTGAAGACGCAAATTCAGGGGGGTTCAAGCTTGTTCTATGCTCAAGTCCCAGGAGGCACAATTCTGCTGCATCATGTTGAAGAGAACGAGAAATTTCCTGCCCAATTTGGCCGTGAGGTTATGGCCGGGTTGCTCAATATGGCAGATAATGCAGATTGGAGGAATCACAAACATAGCAAAGATGAGGAAATGAAAATTGTTGAAAATTTCAAGAGCCGATTTCAAGAATATGATCCAAACTGTTAA 1806 0.4435 MAPRILLCGDVLGRLNQLFKRVSSVTKSAGPFDALLCVGQFFPDSPDQLEEFTAYIEGGSQIPLPTYFVGDYGVAAPKFLLQASKDSANRGFMMDGFKVCHNLYWLKGGGKFPLFGLSVAYLSGRKSSSVQQFGTYTEDDVDALRAIAEEPEIIDLFLTNEWPSGVTNGAAASDIPAGVSDAVGSDSTISELVQEIKPRYHIAGTKGIYYAREPYTNVDAVHITRFIGLASVGNRDKQKFIHAISPTPASTMSSTEIAMKTTTTTLSPYTFVEKITAPMDSTKRSNDSISDSQYWRYDVSQKRQKYETGQTDKMCFKFVSSGSCPHGEKCHFRHDIDAREQCRRGVCFDFLNKGKCERGPDCNFKHNLQDEGDRHPSRRPGSGRSKECWFCLSSPNVETHLIVSIGENYYLALAKGPLVEDHALILPVEHMPSTLSMSSESEIELSRFQSSLKSYCRSQEKEVIFFEWASIRGTHANLQAIPIPSSKAVMVENVFNLAAQKLGFEFVAKTFDSISDGRKFLKTQIQGGSSLFYAQVPGGTILLHHVEENEKFPAQFGREVMAGLLNMADNADWRNHKHSKDEEMKIVENFKSRFQEYDPNC* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g01773 601 Gene3D - 298 370 - -
Phac3g01773 601 Pfam Protein similar to CwfJ C-terminus 2 520 598 IPR006767 -
Phac3g01773 601 ProSiteProfiles Zinc finger C3H1-type profile. 341 369 IPR000571 GO:0046872
Phac3g01773 601 CDD MPP_CWF19_N 6 232 - -
Phac3g01773 601 SUPERFAMILY CCCH zinc finger 312 336 IPR036855 GO:0046872
Phac3g01773 601 Pfam Protein similar to CwfJ C-terminus 1 384 495 IPR006768 -
Phac3g01773 601 SUPERFAMILY HIT-like 386 455 IPR036265 -
Phac3g01773 601 ProSiteProfiles Zinc finger C3H1-type profile. 309 337 IPR000571 GO:0046872
Phac3g01773 601 PANTHER CWF19, CELL CYCLE CONTROL PROTEIN 4 600 IPR040194 -
Phac3g01773 601 SMART c3hfinal6 311 336 IPR000571 GO:0046872
Phac3g01773 601 SMART c3hfinal6 343 368 IPR000571 GO:0046872
Phac3g01773 601 SUPERFAMILY CCCH zinc finger 343 370 IPR036855 GO:0046872
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Phac3g01773 CwfJ_C_1 4.6e-36 CL0265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g01773 K24939 - gmx:100782106 1086.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac3g01773 3 20386428 20392635 Phac3g01773 3 20386428 20392635 ECH