Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g01767 ATGATTCCAGCCTATCGCCACTCAGTATCTTCTGTGATTCCTCTGGATCTTAATGAAGATCAAAACCATGAGCTCTTCACTCCCACTCATCATGCTTACCCTTCTTTTTCTTCTCTATCTTCATCATATCCACTTCTCTTCAACCCTCCAGAACAAGAAGCTGGATCACACTACTGGGAACCAACAAAGCACTTACCAGCTCATGAACAGGCTGAGAAGATTAACCCTACCAGGGGATCATGGGATCACTCGGTGGCAGAAAGCGAGCTCAAGGTGGCAGTTTGGAAGAATAAAGAGAGGAGTGAAGATCATGAGGCAGCTGCTGAGGATGGTTCGGTGAACTTGATGTCTTCAAAGATGAGAATGATGCGGAAGATGATGGTGCCGGATCAAACTGGTGCATATATAGAAGACAGCACTGTGCACAAGTTTGAAGATCAGAAGCAACCGTTGTCACCTCTTGGAACTGATAACAGCAGCAGCAGCAACAACTATTCAAACCACAGTAATAATACTGTTAGGGTTTGTGCTGATTGCCACACCACTAAGACTCCTCTCTGGAGGAGTGGACCAAGAGGCCCCAAGTCACTATGCAACGCCTGTGGAATTCGACAAAGGAAGGCGAGACGAGCCATGGCAGCTGCGGCATCGGGAAATGGAACAGTGATTTTGGAAACTCAGAAATCTGTGAAGGGAAACAAGTTGCAGAAGAAAGAGAAGAAGACAAGAACTCAGGGTGCACCACAGATGAAAAAGAAGCGCAAGCATGGGGTTGGAGCAAAGCCATCTCAAAGCAGAAACAAGTTTGGTTTTGAGGATTTGACATTACGCCTAAGAAAGAGTTTGGCTATGCATCAAGTCTTCCCTCAGGACGAGAAGGAGGCTGCAATCCTTCTCATGGCTTTATCATATGGCCTTGTTCATGGATGA 930 0.4624 MIPAYRHSVSSVIPLDLNEDQNHELFTPTHHAYPSFSSLSSSYPLLFNPPEQEAGSHYWEPTKHLPAHEQAEKINPTRGSWDHSVAESELKVAVWKNKERSEDHEAAAEDGSVNLMSSKMRMMRKMMVPDQTGAYIEDSTVHKFEDQKQPLSPLGTDNSSSSNNYSNHSNNTVRVCADCHTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAAAASGNGTVILETQKSVKGNKLQKKEKKTRTQGAPQMKKKRKHGVGAKPSQSRNKFGFEDLTLRLRKSLAMHQVFPQDEKEAAILLMALSYGLVHG* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g01767 309 ProSitePatterns GATA-type zinc finger domain. 176 201 IPR000679 GO:0006355|GO:0043565
Phac3g01767 309 CDD ZnF_GATA 175 203 IPR000679 GO:0006355|GO:0043565
Phac3g01767 309 Gene3D - 174 212 IPR013088 GO:0006355|GO:0008270
Phac3g01767 309 PANTHER GATA TRANSCRIPTION FACTOR 22-RELATED 1 309 - -
Phac3g01767 309 ProSiteProfiles GATA-type zinc finger domain profile. 170 206 IPR000679 GO:0006355|GO:0043565
Phac3g01767 309 MobiDBLite consensus disorder prediction 231 266 - -
Phac3g01767 309 FunFam GATA transcription factor 21 170 255 - -
Phac3g01767 309 Pfam GATA zinc finger 176 209 IPR000679 GO:0006355|GO:0043565
Phac3g01767 309 MobiDBLite consensus disorder prediction 151 169 - -
Phac3g01767 309 SMART GATA_3 170 221 IPR000679 GO:0006355|GO:0043565
Phac3g01767 309 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 168 210 - -
Phac3g01767 309 MobiDBLite consensus disorder prediction 247 261 - -
Phac3g01767 309 MobiDBLite consensus disorder prediction 146 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g01767 Phac-Chr3 20330608 20332484 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g01767 15 309 C2C2-Gata Transcription Factor Family AT4G26150 33.967 5.77e-37 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Phac3g01767 GATA 3.9e-17 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g01767 - - gmx:100810698 418.313