Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g01743 ATGACATTATTGACCAACACTTTTGAATCAGAATGCTTGCTTCTGTCCCCAAGAATGCCTCGGAGAATACTTCAAGTGACTGCAGAGGAACCTCCTTCATCCTCTGTGGCTTTGAAAACCTCCGCGTCACGCTACGCCCCTGGAGTGTTCTTCTTCCTTGGGGGGACTGTATTGCTCATCATATTGCTCATTCTTCTGTTTATATTTTGGAGGCGTACTAAGGGGCCAGCAAAGGTGACGGAGAACACAACACTAACAGGTCAGCAACATGGGAAATATATTGAACCGTCTGAGGTGATGAAGATGATAGTCCCAAATATTCAACAAGGACAGATGGAGTTCATTAGTGGGAACCTTCGGACAATTAGCTACTTTGACTTCCGGACATTGAGGAGAGCCACTAAGAATTTCCATCCTCGAAATCTGCTTGGAAGTGGTGGATTCGGGCCTGTCTATCAGGGCAAGTTGGCAGATGGAAGGCTTGTTGCAGTAAAGACATTGTCTCTTGACAAGTCTCAACAAGGAGAAAAAGAATTTCTGGCAGAAGTGAGAATGATCACAAGCATCCAACACAAAAATCTGGTTCGCCTTATCGGATGCTGCACAGATGGGCCTCAAAAGATACTCGTGTACGAATATATGAAGAACAGAAGTTTGGACCTCATAATTTATGGAAAGAGTGATCAATTTCTGAATTGGAACACTAGATTCCAAATTATTCTTGGTGTAGCACGGGGATTGCAATACCTCCACGAGGATTCGCAGTTAAGAATTGTTCACCGAGACATCAAAGCAAGCAACATTCTTCTTGATGAGAAGTTTCAGCCTAGGATTGGAGACTTTGGGCTAGCTAGGTTCTTCCCCGAAGACCAAGCTTATCTTAGCACTCAGTTCGCAGGAACATTAGGTTATACAGCTCCTGAGTATGCCATTAGAGGAGAGTTGTCCGAAAAGGCAGACATCTATAGTTTCGGAGTTCTTGTGCTTGAAATCATCAGTTGCAGGAAAAACACAGACCTTACTTTACCATCAGAAATGCAGTACCTCCCTGAATATGCATGGAAACTTTATGACAAGTCAATGTTGATGGAAATAGTGGATCCAAAGCTGCGAGAACATGGCATGGAAGAAAAGGATGTTATGCAAGCATTTCAGGTGGCCTTATCGTGCCTTCAGCCACACGCAGATTTGAGACCTGCGATGTCAGAAATCGTAGCATTGCTGACATTCAAAGTTGAAATGGTTACCGCGCCAATGAGACCAACCTTCTTTCATAGGAGACGCGTAATGGATGATGAGAACCATTCTTGGGGAGCCATATCCTCAGAGGGTTCTACAACTGCAGTGACATCATCCTAG 1359 0.4422 MTLLTNTFESECLLLSPRMPRRILQVTAEEPPSSSVALKTSASRYAPGVFFFLGGTVLLIILLILLFIFWRRTKGPAKVTENTTLTGQQHGKYIEPSEVMKMIVPNIQQGQMEFISGNLRTISYFDFRTLRRATKNFHPRNLLGSGGFGPVYQGKLADGRLVAVKTLSLDKSQQGEKEFLAEVRMITSIQHKNLVRLIGCCTDGPQKILVYEYMKNRSLDLIIYGKSDQFLNWNTRFQIILGVARGLQYLHEDSQLRIVHRDIKASNILLDEKFQPRIGDFGLARFFPEDQAYLSTQFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYDKSMLMEIVDPKLREHGMEEKDVMQAFQVALSCLQPHADLRPAMSEIVALLTFKVEMVTAPMRPTFFHRRRVMDDENHSWGAISSEGSTTAVTSS* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g01743 452 Pfam Protein tyrosine and serine/threonine kinase 141 407 IPR001245 GO:0004672|GO:0006468
Phac3g01743 452 CDD STKc_IRAK 143 409 - -
Phac3g01743 452 Gene3D Transferase(Phosphotransferase) domain 1 214 417 - -
Phac3g01743 452 Gene3D Phosphorylase Kinase; domain 1 107 213 - -
Phac3g01743 452 SMART serkin_6 137 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g01743 452 ProSitePatterns Serine/Threonine protein kinases active-site signature. 258 270 IPR008271 GO:0004672|GO:0006468
Phac3g01743 452 FunFam Cysteine-rich receptor-like protein kinase 10 102 213 - -
Phac3g01743 452 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 214 418 - -
Phac3g01743 452 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 43 439 - -
Phac3g01743 452 ProSiteProfiles Protein kinase domain profile. 137 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g01743 452 SUPERFAMILY Protein kinase-like (PK-like) 118 411 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g01743 Phac-Chr3 20211361 20214686 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g01743 125 424 Receptor kinase-like Gene Family AT1G56120 49.000 1.78e-99 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phac3g01743 PK_Tyr_Ser-Thr 1.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g01743 - - ccaj:109792436 717.613