Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g01732 ATGGGGAACTGTTGGAGTTTTCAATTAGGTTCTGCTGTCGATCATCGAGACTCCAGTACTGCCCCCAACCCCAACAATCAACCAGATGATCCGGGGAGTATTCAGTTTTCTGCTGGTCTAAGCAACAAAAGGTTAATACAGAATAGTAATTCTACTTCTCTTGGACATAGCAGCCACTCTGGAGGAATCAGCAGGTTTTTTGGACCAAGTAGCAGTAATAACTACTCAACAGGCAATAACACTAGCACATCCTTTTGGGGCTCTGAGAATAGCCAAGCCTCTCGAGTCAGGGATGAAGAGGAGAGGGGGCAAATCTTGGATGTTGCAGATTTGAGAGAATTTACTTTGGCAGACCTGAAAGCAGCCACCAGAAATTTCAGAGCTGACTCTCTGTTGGGGGAGGGGGGATTTGGTAAAGTATACAAGGGTTTGATTAGAGGTGAGGGGTTGGCTATTGCTATCAAGAAGTTGAATTCTGAAAGCAAGCAAGGATTTGTGGAATGGCAGTCAGAAATTAATTTCTTAGGGAGGCTTTCTCATCCCAACCTCGTTAAGTTGTTGGGATTTGGGAGGCATGATGGTAAACTGTTTCTGGTTTATGAATTTATGCCTCGTGGCAGCTTGGATAACCATCTATTTGGAAGAGGAGCAAATGTTCGGCCACTTTCTTGGGACACAAGGCTAAAAATTATGATTGGAGCAGCTAGGGGGTTGCATTTCCTTCACAGCTTGGAGATTCCGATTATATACAGAGATTTGAAACCCTCAAATATTCTACTCGACTCAACATATGCGGCTAAGTTATCAGATTTTGGCTTAGCCAAGTCTGTTGCTTCGCCTGATCAAAGTCACGTATCAACACAGATTGTGGGAACATACGGCTATGCTGCTCCTGAGTACATTGCAACAGGCCGTTTGTACGTGAAAAGTGATGTGTACGGATTTGGAATTCTTTTGGTGGAGTTGCTGACTGGCAAGAGGATTACTGGTATAATGAAACTATGTGAGGCAACGTCCCTGAGGGATTGGGTCAAAAGAAATCTTCTAAATAGAGGCTTTTTAAGAAGCACTATGGATGTAAAATTGGAAGGAAAGTATCCTTCCAACTTAGCATTTCAAATGGTTCAACTAGCTCTCAAATGCATCCAAACAGAACCCAAAGTGAGACCATCAATGAAAGAAGTTCTTGAAAGACTAGAACAAATTGAAGCAGCCAATGAAAAACCGGCTGATAACAGAAGACAGGTTAATCGTTCTCGGGTTGTTCAACAACATGGCAGTGAAGATGTTGGCTAA 1296 0.4298 MGNCWSFQLGSAVDHRDSSTAPNPNNQPDDPGSIQFSAGLSNKRLIQNSNSTSLGHSSHSGGISRFFGPSSSNNYSTGNNTSTSFWGSENSQASRVRDEEERGQILDVADLREFTLADLKAATRNFRADSLLGEGGFGKVYKGLIRGEGLAIAIKKLNSESKQGFVEWQSEINFLGRLSHPNLVKLLGFGRHDGKLFLVYEFMPRGSLDNHLFGRGANVRPLSWDTRLKIMIGAARGLHFLHSLEIPIIYRDLKPSNILLDSTYAAKLSDFGLAKSVASPDQSHVSTQIVGTYGYAAPEYIATGRLYVKSDVYGFGILLVELLTGKRITGIMKLCEATSLRDWVKRNLLNRGFLRSTMDVKLEGKYPSNLAFQMVQLALKCIQTEPKVRPSMKEVLERLEQIEAANEKPADNRRQVNRSRVVQQHGSEDVG* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g01732 431 PANTHER OS01G0588500 PROTEIN-RELATED 81 403 - -
Phac3g01732 431 SMART serkin_6 126 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g01732 431 ProSiteProfiles Protein kinase domain profile. 126 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g01732 431 MobiDBLite consensus disorder prediction 77 92 - -
Phac3g01732 431 ProSitePatterns Serine/Threonine protein kinases active-site signature. 248 260 IPR008271 GO:0004672|GO:0006468
Phac3g01732 431 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 203 413 - -
Phac3g01732 431 Pfam Protein kinase domain 128 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g01732 431 FunFam receptor-like protein kinase FERONIA 88 202 - -
Phac3g01732 431 Gene3D Transferase(Phosphotransferase) domain 1 203 427 - -
Phac3g01732 431 ProSitePatterns Protein kinases ATP-binding region signature. 132 156 IPR017441 GO:0005524
Phac3g01732 431 SUPERFAMILY Protein kinase-like (PK-like) 111 406 IPR011009 -
Phac3g01732 431 MobiDBLite consensus disorder prediction 77 101 - -
Phac3g01732 431 MobiDBLite consensus disorder prediction 13 37 - -
Phac3g01732 431 CDD STKc_IRAK 132 402 - -
Phac3g01732 431 MobiDBLite consensus disorder prediction 406 431 - -
Phac3g01732 431 Gene3D Phosphorylase Kinase; domain 1 110 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g01732 Phac-Chr3 20127054 20129847 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g01732 73 399 Glycoside Hydrolase AT3G07070 40.244 1.27e-81 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Phac3g01732 Pkinase 1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g01732 - - pvu:PHAVU_003G139200g 820.461