Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g01731 ATGGGGAACTGTTGGAGTCTTAAATCAGCTTCTAAACCTGATGATCATCCCAACGCGAAGAACCATTTAGGGAGGAATCAGTTCTCTGCCGGTCTCAGCAACACAAGACTTATACAGAATGGCGATTCTACTTCTCGTGGGTGTAGAAGTGACTTTGGAGGAAGCAGTAGTCTGTTTGGGCAAAGTAGTAGCAATAATCACACATCAGGAAATAACACTAGCACGTCATTTTGGGGCTCTGAGAATAGCCAGGCGTCTGGAGTCAGAGATGGAGAGGAGTTTCCTCATGGTGAGATCTTGAATGCTCCAAACTTAAGAGTATTTACTTTGGCAGAATTGAGGGCTGCTACCAAAAAATTCAGAGCTGACAGGGTGATAGGAAACGGGGGTTTTGGTGCAGTATACAAGGGTTTGATTAGAGGAGAGGGATTGACTATTGCCATCAAGAAATGGAATCCCGAAAGCTTGCAAGGAGTTGCGGAATGGCAGTCAGAGGTGAATTTCTTAGGGAGGCTTAAGTTGCTGGGATTTCGGCGAGAGGATAGTGAGCTGTTCCTGGTGTATGAATTCATGCATCGTGGCTCCTTGGATAACCACCTATTTGGAAGAGGTGCAAATGTTCAACCCCTTTCTTGGGATAAAAGGCTAAAGATTATGATTGGAGCGGCTAGGGGACTTAATTTCCTTCATTCCATGGAAATGAAAATTGTACATAGAGATTTTAAACCCTCAAATATACTCCTTGACGAGACATTTACGGCAAAGTTATCAGACTTTGGCTTAGCCAAATCTTTTTCTTCGATTGATCAGACTCACGTATCAACACGAGTTGTGGGAACAGGAGGCTATGCTGCTCCTGAGTATGTGGCAACAGGTCGTTTGAGAGTGAAAAGTGACGTGTATTCATTCGGAATTGTTTTGACGGAGGTGCTGACAGGGGTGCGCTTTCGGATGCTAAAGTCCTACAAGGATTGGGTCAAATCAAATCTACTAAATAGAGCAAAAATAAGAAGCACTATGGATGCAAAGTTGGAAGGAAAGTATCCAACCAACTTAGCATTACAGGTAGCTCAACTAGCTCTCAAATGCATCCAAACAGATCCAAAAGTGAGGCCATCGATGAAAGAAGTTCTTGAAAGATTGGAACAGATTGAAGCAGCTAATGAGAAACCTGTTGGTAACAATTATAACAGAAAACGGGTTAATCGTTCCCAGGTAGTTCAACAACGCAATCAGCCAAATGGTGCTCAGTAG 1254 0.4338 MGNCWSLKSASKPDDHPNAKNHLGRNQFSAGLSNTRLIQNGDSTSRGCRSDFGGSSSLFGQSSSNNHTSGNNTSTSFWGSENSQASGVRDGEEFPHGEILNAPNLRVFTLAELRAATKKFRADRVIGNGGFGAVYKGLIRGEGLTIAIKKWNPESLQGVAEWQSEVNFLGRLKLLGFRREDSELFLVYEFMHRGSLDNHLFGRGANVQPLSWDKRLKIMIGAARGLNFLHSMEMKIVHRDFKPSNILLDETFTAKLSDFGLAKSFSSIDQTHVSTRVVGTGGYAAPEYVATGRLRVKSDVYSFGIVLTEVLTGVRFRMLKSYKDWVKSNLLNRAKIRSTMDAKLEGKYPTNLALQVAQLALKCIQTDPKVRPSMKEVLERLEQIEAANEKPVGNNYNRKRVNRSQVVQQRNQPNGAQ* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g01731 417 Pfam Protein kinase domain 121 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g01731 417 Gene3D Phosphorylase Kinase; domain 1 104 190 - -
Phac3g01731 417 ProSiteProfiles Protein kinase domain profile. 120 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g01731 417 MobiDBLite consensus disorder prediction 1 26 - -
Phac3g01731 417 MobiDBLite consensus disorder prediction 395 417 - -
Phac3g01731 417 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
Phac3g01731 417 SUPERFAMILY Protein kinase-like (PK-like) 100 381 IPR011009 -
Phac3g01731 417 Gene3D Transferase(Phosphotransferase) domain 1 191 410 - -
Phac3g01731 417 ProSitePatterns Protein kinases ATP-binding region signature. 126 150 IPR017441 GO:0005524
Phac3g01731 417 PANTHER OS01G0588500 PROTEIN-RELATED 68 385 - -
Phac3g01731 417 MobiDBLite consensus disorder prediction 59 87 - -
Phac3g01731 417 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 191 393 - -
Phac3g01731 417 MobiDBLite consensus disorder prediction 59 95 - -
Phac3g01731 417 MobiDBLite consensus disorder prediction 389 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g01731 Phac-Chr3 20113455 20115790 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g01731 105 381 Receptor kinase-like Gene Family AT3G58690 45.051 2.64e-74 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Phac3g01731 Pkinase 3.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g01731 - - gmx:100813304 562.377