Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g01729 ATGCCACTAGATCTTGAAGCCGTTCCCAAGATTAGGATGGAAGAACAAACAGCCATCGAAGAAGCAGCTTCCGCTGGGTTGAAAAGTATGGAGCATCTCATTCGTGTCCTTTCCTCTCAAATCCCTTCTTCTTCCGCCGCCTCCTCTTCTTCCGCACACCACCGCCGTCTTAATCTCAACCACCTTGACTGCACGGAAATCACCGACTTCACTGTCTCCAAGTTCAAACAAGTCATCAACTTGTTGAATCGCACTGGTCACGCTCGCTTTCGTCGCGCACCTTCCCATCCCTCTCCCTCCCCATCCCCCTCTCTTCCTTCTCCACCGCAACCTCAAACTCAAAAACCCACTCTTCATTTTGCAAACCCTAAGGTCAAGTCAATTCCCAATCCTAACCCTTCTTCCACGGATTTCTCGGTCTCTCAATATTCCAAGACCAAAGACACCACCTTTACCATATCCCCTCCCATCTCCACCACCACCTCCTCCTTCATGTCCTCCATCACGGCCGACGGAAGCGTCTCCGACGGCAAGATCGGCCCCGCCATCCTCGCCTCCGGGAAGCCTCCTCTCTCCTCATCCCACCGCAAAAGGTGTCACGACGCCACCCTCTCCGCCGGGAAAGCCTCATCCTCCGCCAACTGTCATTGCTCCAAGAGAAGGAAAACCCGTCTGAAACGAATGATTCGAGTGCCGGCGGTGAGTTCGAAGATCGCCGATATCCCTGTGGACGAGTACTCCTGGAGAAAGTATGGTCAAAAACCCATCAAGGGATCACCCTACCCACGGTATTTTTCCTATTCCTACCCTTCTGTAATATTGTTGAATCCGTCAAAGTCAAACATCAATCTCCACCCCTTTCAACTTTGGAACCCCCGAATGATATAA 888 0.518 MPLDLEAVPKIRMEEQTAIEEAASAGLKSMEHLIRVLSSQIPSSSAASSSSAHHRRLNLNHLDCTEITDFTVSKFKQVINLLNRTGHARFRRAPSHPSPSPSPSLPSPPQPQTQKPTLHFANPKVKSIPNPNPSSTDFSVSQYSKTKDTTFTISPPISTTTSSFMSSITADGSVSDGKIGPAILASGKPPLSSSHRKRCHDATLSAGKASSSANCHCSKRRKTRLKRMIRVPAVSSKIADIPVDEYSWRKYGQKPIKGSPYPRYFSYSYPSVILLNPSKSNINLHPFQLWNPRMI* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g01729 295 SMART WRKY_cls 242 287 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac3g01729 295 MobiDBLite consensus disorder prediction 122 141 - -
Phac3g01729 295 Pfam WRKY DNA -binding domain 244 265 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac3g01729 295 SUPERFAMILY WRKY DNA-binding domain 241 265 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac3g01729 295 MobiDBLite consensus disorder prediction 96 113 - -
Phac3g01729 295 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 16 264 IPR044810 GO:0003700
Phac3g01729 295 MobiDBLite consensus disorder prediction 90 117 - -
Phac3g01729 295 Gene3D WRKY domain 221 271 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac3g01729 295 MobiDBLite consensus disorder prediction 127 141 - -
Phac3g01729 295 Pfam Plant zinc cluster domain 196 240 IPR018872 -
Phac3g01729 295 ProSiteProfiles WRKY domain profile. 237 265 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g01729 Phac-Chr3 20074441 20076744 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g01729 1 263 WRKY Transcription Factor Family AT4G31550 50.530 5.24e-71 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phac3g01729 Plant_zn_clust 7.9e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g01729 - - var:108322692 377.481
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac3g01729 3 20074441 20076744 Phac3g01729 3 20074441 20076744 ECH