Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac3g01729 | ATGCCACTAGATCTTGAAGCCGTTCCCAAGATTAGGATGGAAGAACAAACAGCCATCGAAGAAGCAGCTTCCGCTGGGTTGAAAAGTATGGAGCATCTCATTCGTGTCCTTTCCTCTCAAATCCCTTCTTCTTCCGCCGCCTCCTCTTCTTCCGCACACCACCGCCGTCTTAATCTCAACCACCTTGACTGCACGGAAATCACCGACTTCACTGTCTCCAAGTTCAAACAAGTCATCAACTTGTTGAATCGCACTGGTCACGCTCGCTTTCGTCGCGCACCTTCCCATCCCTCTCCCTCCCCATCCCCCTCTCTTCCTTCTCCACCGCAACCTCAAACTCAAAAACCCACTCTTCATTTTGCAAACCCTAAGGTCAAGTCAATTCCCAATCCTAACCCTTCTTCCACGGATTTCTCGGTCTCTCAATATTCCAAGACCAAAGACACCACCTTTACCATATCCCCTCCCATCTCCACCACCACCTCCTCCTTCATGTCCTCCATCACGGCCGACGGAAGCGTCTCCGACGGCAAGATCGGCCCCGCCATCCTCGCCTCCGGGAAGCCTCCTCTCTCCTCATCCCACCGCAAAAGGTGTCACGACGCCACCCTCTCCGCCGGGAAAGCCTCATCCTCCGCCAACTGTCATTGCTCCAAGAGAAGGAAAACCCGTCTGAAACGAATGATTCGAGTGCCGGCGGTGAGTTCGAAGATCGCCGATATCCCTGTGGACGAGTACTCCTGGAGAAAGTATGGTCAAAAACCCATCAAGGGATCACCCTACCCACGGTATTTTTCCTATTCCTACCCTTCTGTAATATTGTTGAATCCGTCAAAGTCAAACATCAATCTCCACCCCTTTCAACTTTGGAACCCCCGAATGATATAA | 888 | 0.518 | MPLDLEAVPKIRMEEQTAIEEAASAGLKSMEHLIRVLSSQIPSSSAASSSSAHHRRLNLNHLDCTEITDFTVSKFKQVINLLNRTGHARFRRAPSHPSPSPSPSLPSPPQPQTQKPTLHFANPKVKSIPNPNPSSTDFSVSQYSKTKDTTFTISPPISTTTSSFMSSITADGSVSDGKIGPAILASGKPPLSSSHRKRCHDATLSAGKASSSANCHCSKRRKTRLKRMIRVPAVSSKIADIPVDEYSWRKYGQKPIKGSPYPRYFSYSYPSVILLNPSKSNINLHPFQLWNPRMI* | 296 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac3g01729 | 295 | SMART | WRKY_cls | 242 | 287 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Phac3g01729 | 295 | MobiDBLite | consensus disorder prediction | 122 | 141 | - | - | |
Phac3g01729 | 295 | Pfam | WRKY DNA -binding domain | 244 | 265 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Phac3g01729 | 295 | SUPERFAMILY | WRKY DNA-binding domain | 241 | 265 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Phac3g01729 | 295 | MobiDBLite | consensus disorder prediction | 96 | 113 | - | - | |
Phac3g01729 | 295 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 16 | 264 | IPR044810 | GO:0003700 | |
Phac3g01729 | 295 | MobiDBLite | consensus disorder prediction | 90 | 117 | - | - | |
Phac3g01729 | 295 | Gene3D | WRKY domain | 221 | 271 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Phac3g01729 | 295 | MobiDBLite | consensus disorder prediction | 127 | 141 | - | - | |
Phac3g01729 | 295 | Pfam | Plant zinc cluster domain | 196 | 240 | IPR018872 | - | |
Phac3g01729 | 295 | ProSiteProfiles | WRKY domain profile. | 237 | 265 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac3g01729 | Phac-Chr3 | 20074441 | 20076744 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac3g01729 | 1 | 263 | WRKY Transcription Factor Family | AT4G31550 | 50.530 | 5.24e-71 | 218 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Phac3g01729 | Plant_zn_clust | 7.9e-17 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac3g01729 | - | - | var:108322692 | 377.481 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Phac3g01729 | 3 | 20074441 | 20076744 | Phac3g01729 | 3 | 20074441 | 20076744 | ECH |