Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g01728 ATGCCACTAGATCTTGAAGCCGTTCCCAAGATTAGGATGGAAGAACAAACAGCCATCGAAGAAGCAGCTTCCGCTGGGTTGAAAAGTATGGAGCATCTCATTCGTGTCCTTTCCTCTCAAATCCCTTCTTCTTCCGCCGCCTCCTCTTCTTCCGCACACCACCGCCGTCTTAATCTCAACCACCTTGACTGCACGGAAATCACCGACTTCACTGTCTCCAAGTTCAAACAAGTCATCAACTTGTTGAATCGCACTGGTCACGCTCGCTTTCGTCGCGCACCTTCCCATCCCTCTCCCTCCCCATCCCCCTCTCTTCCTTCTCCACCGCAACCTCAAACTCAAAAACCCACTCTTCATTTTGCAAACCCTAAGGTCAAGTCAATTCCCAATCCTAACCCTTCTTCCACGGATTTCTCGGTCTCTCAATATTCCAAGACCAAAGACACCACCTTTACCATATCCCCTCCCATCTCCACCACCACCTCCTCCTTCATGTCCTCCATCACGGCCGACGGAAGCGTCTCCGACGGCAAGATCGGCCCCGCCATCCTCGCCTCCGGGAAGCCTCCTCTCTCCTCATCCCACCGCAAAAGGTGTCACGACGCCACCCTCTCCGCCGGGAAAGCCTCATCCTCCGCCAACTGTCATTGCTCCAAGAGAAGGAAAACCCGTCTGAAACGAATGATTCGAGTGCCGGCGGTGAGTTCGAAGATCGCCGATATCCCTGTGGACGAGTACTCCTGGAGAAAGTATGGTCAAAAACCCATCAAGGGATCACCCTACCCACGAGGGTACTACAAGTGCAGTAGCGTGCGAGGGTGTCCGGCGAGGAAGCACGTGGAGCGGGCCCAGGATGACCCCAACATGCTCATCGTTACCTACGAGGGAGAGCACCGTCATCCGCAGCCGCGTCTGCCGGAAACCGCCGCCACCGCTGCAGTTGCTTTCGGTGCTCAGCCTGTTTAA 966 0.5518 MPLDLEAVPKIRMEEQTAIEEAASAGLKSMEHLIRVLSSQIPSSSAASSSSAHHRRLNLNHLDCTEITDFTVSKFKQVINLLNRTGHARFRRAPSHPSPSPSPSLPSPPQPQTQKPTLHFANPKVKSIPNPNPSSTDFSVSQYSKTKDTTFTISPPISTTTSSFMSSITADGSVSDGKIGPAILASGKPPLSSSHRKRCHDATLSAGKASSSANCHCSKRRKTRLKRMIRVPAVSSKIADIPVDEYSWRKYGQKPIKGSPYPRGYYKCSSVRGCPARKHVERAQDDPNMLIVTYEGEHRHPQPRLPETAATAAVAFGAQPV* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g01728 321 MobiDBLite consensus disorder prediction 122 141 - -
Phac3g01728 321 Pfam Plant zinc cluster domain 196 240 IPR018872 -
Phac3g01728 321 SMART WRKY_cls 242 302 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac3g01728 321 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 16 308 IPR044810 GO:0003700
Phac3g01728 321 SUPERFAMILY WRKY DNA-binding domain 241 303 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac3g01728 321 ProSiteProfiles WRKY domain profile. 237 303 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac3g01728 321 MobiDBLite consensus disorder prediction 96 113 - -
Phac3g01728 321 MobiDBLite consensus disorder prediction 90 117 - -
Phac3g01728 321 Pfam WRKY DNA -binding domain 244 301 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac3g01728 321 MobiDBLite consensus disorder prediction 127 141 - -
Phac3g01728 321 Gene3D WRKY domain 229 304 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac3g01728 321 FunFam WRKY transcription factor 65 226 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g01728 Phac-Chr3 20074441 20076744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g01728 1 318 WRKY Transcription Factor Family AT2G24570 50.571 2.08e-95 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phac3g01728 WRKY 2.3e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g01728 - - var:108322692 494.967