Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phac3g01715 | ATGAGTTTCTCCAAGGGTTCTCCTGGCAGCCAGACGCCGGGTGATATTGAGGCTGGGTCTCCCACTGGCTGGTCTGATGATTTTGATGGAGACTTTTCTGCTGATCCATTTGATCTTACCAGAACAAAGAATGCTCCGGTTCAACGCCTCAGGCGCTGGAGGCAAGCGGCGCTTGTCCTCAATGCTTCTCGTCGATTTCGTTACACCTTGGACTTAAAGAAAGAAGAAGAGAAGAAGAGAGTACTAAGAATTGTTATAGTGCATACACGGGCCATTCAGGCTGCATATCGGTTCAAGGAAGCTGGGCAAATGAATGGACTACGAACTATAAAACCTCATCCAAGCTCCACTGGAGAATTTTCACCTCATTCAAGCTCCACTGGAGAATTTTCAATTGGACAAGAACAACTTTCTTCAATTTCAAGGAACCGTGATACTACTGCTCTGTGGGAAAATGAAGGGGTTGTAGGGTTATCAAATTTATTGAAAACCAATTTAGAGAAGGGCATTCGAGGTGATGATGACGACTTGGTAATACGGAGGAATGCATTTGGCTCCAACAACTACCCTCGAAAGACCGGAAGAAGATTTTTGATGTTTATGTGGGATGCTTGCAAGGATCTGACCTTGATTATTCTAATGGTAGCCGCAATGGCTTCATTAGCACTGGGGATAAAATCTGAGGGTATCCAGGAAGGTTGGTATGACGGGGGAAGCATTGCTTTTGCAGTTATTCTTGTTATTCTTGTTACAGCTATAAGTGATTATAAGCAGTCTCTTCAGTTTCAAGATCTAAATGAGCACAAGAGAAACATACGTTTGGAGGTCACTCGAGATGGTAGAAGAGTTGAGATCTCCATATATGATATTGTTGTTGGTGATGTTATACCCCTTAACATTGGTAACCAGGTCCCCGCTGATGGAGTTTTGATCACTGGTCACTCTCTTGCAATTGATGAATCAAGTATGACCGGGGAGAGCAAAATTGTCGAAAAAAATTCTAATGATCCTTTTCTGATTTCTGGTTGTAAAGTTGCAGATGGCAATGGAACTATGCTGGTAACGGCTGTTGGTATTAATACTGAATGGGGGCTTCTAATGTCTACCATTTCAGAAGACAATGGTGAAGAAACTCCTTTGCAGGTACGCTTAAATGGTCTAGCCACCTTAATTGGTATTGTTGGACTCTCTGTGGCTGTTATTGTTCTGATAGTGCTGCTGGCCAGGTATTTCTCTGGGCATACTAGAAACCCAGATGGAAGTGTTCAATTTATAGCAGGCAAAACGAAAGTTGGTCATGCTATTGATGGAGTAATCAAGATATTCACTATTGCGGTCACCATTGTAGTGGTTGCAGTGCCTGAAGGGCTGCCTTTAGCAGTTACCTTAACACTTGCCTACTCAATGAAAAAAATGATGGCAGATAAAGCTTTGGTGAGGAGGCTCTCTGCCTGTGAGACAATGGGGTCAGCTACAACCATTTGCAGTGATAAGACTGGAACATTGACTATGAATCAGATGACTGTGGTTGAGGCTTGCATTGGTGGGAAGAAGATCATTCCTCCTGATGATTCACAACAATTCTCTCCTATGCTACGCTCTTTGCTGATTGAAGGTGTTGCACAGAACACTAATGGAAGTGTTTATGTCCCTGAGGGTGGTAATGATGTTGAGATTTCTGGATCACCAACCGAAAAGGCAATTTTAGAGTGGGGAATTAAGCTTGGGATGCGTTTTGATGCTGCCAGATCAGAATCATCAATTATTCATGTCTTCCCCTTTAATTCAGAGAAAAAGCGAGGAGGAGTTGCAACACAGATGCCTGACTCTGAAATCCATATACATTGGAAAGGTGCTGCTGAGATAGTCCTTGCTTGCTGTACAGGGTATATTGATGTTAATGATCAGTTGGTAGAGATGGATGAAGAGAAGATGTCACAATTTAAAAAAGCTATTGAAGATATGGCTGCTGATAGTCTACGCTGTGTTGCAATTGCATATAGATCATATGAAATGGAGAATGTTCCAACTAGTGAAGAACTTGCTCACTGGTCATTACCAGACAATGATCTTTTTTTATTGGCTATTATTGGCCTGAAGGATCCTTGTCGACCTGGGGTCAAAGATGCAGTGCAGCTTTGCCAAAAGGCTGGGGTTAAGGTAAAAATGGTCACTGGTGACAATGTTAAAACCGCAAAAGCAATTGCTGTGGAATGTGGAATTCTGGGTTCAATCTCTGAAGCTACAGAGCCAATCATCATTGAAGGAAAAAGATTTCGTGCCTTGACAGATGAAGGGAGAGTAGAAATTGTTGACAGCATATTGGTTATGGGACGGTCATCTCCTAATGACAAGCTTTTGCTTGTGCAAGCATTGAGGAGGAAGGGCCATGTTGTGGCTGTAACTGGAGATGGAACAAATGATGCTCCCGCACTACATGAGGCCGATATTGGTCTTGCAATGGGTATACAAGGAACAGAAGTTGCTAAAGAGAGCTCTGATATTATTATTTTGGATGACAATTTTGCTTCAGTTGTGAAGGTTGTCAAATGGGGGCGGTCTGTATATGCAAATATTCAGAAATTTATCCAGTTTCAGCTTACAGTCAATATAGCAGCACTTGCTATAAACGTTGTTGCTGCATTTTCCACAGGTGACATCCCACTAAATACAGTACAGCTTCTCTGGGTAAATCTTATCATGGATACTCTTGGAGCATTAGCTTTGGCAACTGAACCACCAACTGATTCCCTGATGGATCAGCGTCCAATGGGCCGAAGAGAACCTCTTGTATCAAATATTATGTGGAGGAATCTGCTGATACAGGCAATGTATCAAGTTTCTGTGTTGCTTATACTTAATTTCCAAGGTGTGAAGTTACTGGGTTTGAGGAATGAACCCAACCGCCCTGCAATCAAAGTGAAGAACTCTCTGATATTCAATGCATTTGTTTTTTGTCAAGTCTTTAATGAATTTAATGCCCGAAAGCCAGATAAATTCAACATATTCAAGGGAGTCACAAGAAACTACCTCTTTATGGGGATAGTGGGAACAACTGTTGTGCTCCAGATTGTCATCATTGAATTTCTTGGAAAGTTCACTAAAACAGTCAAGCTTAATTGGAAGCTGTGGCTCATTTCTGTTATTATAGCATTTATCAGCTGGCCTCTTGCTGTGGTTGGAAAACTGATACCAGTACCGAAGGTTGAACTCAGTAACTTTTTCCGAAGATATATTCGAAGATCTTAA | 3249 | 0.4192 | MSFSKGSPGSQTPGDIEAGSPTGWSDDFDGDFSADPFDLTRTKNAPVQRLRRWRQAALVLNASRRFRYTLDLKKEEEKKRVLRIVIVHTRAIQAAYRFKEAGQMNGLRTIKPHPSSTGEFSPHSSSTGEFSIGQEQLSSISRNRDTTALWENEGVVGLSNLLKTNLEKGIRGDDDDLVIRRNAFGSNNYPRKTGRRFLMFMWDACKDLTLIILMVAAMASLALGIKSEGIQEGWYDGGSIAFAVILVILVTAISDYKQSLQFQDLNEHKRNIRLEVTRDGRRVEISIYDIVVGDVIPLNIGNQVPADGVLITGHSLAIDESSMTGESKIVEKNSNDPFLISGCKVADGNGTMLVTAVGINTEWGLLMSTISEDNGEETPLQVRLNGLATLIGIVGLSVAVIVLIVLLARYFSGHTRNPDGSVQFIAGKTKVGHAIDGVIKIFTIAVTIVVVAVPEGLPLAVTLTLAYSMKKMMADKALVRRLSACETMGSATTICSDKTGTLTMNQMTVVEACIGGKKIIPPDDSQQFSPMLRSLLIEGVAQNTNGSVYVPEGGNDVEISGSPTEKAILEWGIKLGMRFDAARSESSIIHVFPFNSEKKRGGVATQMPDSEIHIHWKGAAEIVLACCTGYIDVNDQLVEMDEEKMSQFKKAIEDMAADSLRCVAIAYRSYEMENVPTSEELAHWSLPDNDLFLLAIIGLKDPCRPGVKDAVQLCQKAGVKVKMVTGDNVKTAKAIAVECGILGSISEATEPIIIEGKRFRALTDEGRVEIVDSILVMGRSSPNDKLLLVQALRRKGHVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVKWGRSVYANIQKFIQFQLTVNIAALAINVVAAFSTGDIPLNTVQLLWVNLIMDTLGALALATEPPTDSLMDQRPMGRREPLVSNIMWRNLLIQAMYQVSVLLILNFQGVKLLGLRNEPNRPAIKVKNSLIFNAFVFCQVFNEFNARKPDKFNIFKGVTRNYLFMGIVGTTVVLQIVIIEFLGKFTKTVKLNWKLWLISVIIAFISWPLAVVGKLIPVPKVELSNFFRRYIRRS* | 1083 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phac3g01715 | 1082 | FunFam | Calcium-transporting ATPase 9 plasma membrane-type | 349 | 519 | - | - | |
| Phac3g01715 | 1082 | Pfam | Ca2+-ATPase N terminal autoinhibitory domain | 34 | 77 | IPR024750 | GO:0005516 | |
| Phac3g01715 | 1082 | Gene3D | - | 505 | 702 | IPR023299 | GO:0000166 | |
| Phac3g01715 | 1082 | PANTHER | CATION TRANSPORTING ATPASE | 119 | 1066 | - | - | |
| Phac3g01715 | 1082 | SUPERFAMILY | Calcium ATPase, transduction domain A | 274 | 368 | IPR008250 | - | |
| Phac3g01715 | 1082 | FunFam | Calcium-transporting ATPase | 819 | 1068 | - | - | |
| Phac3g01715 | 1082 | MobiDBLite | consensus disorder prediction | 111 | 132 | - | - | |
| Phac3g01715 | 1082 | SMART | Cation_ATPase_N_a_2 | 149 | 225 | IPR004014 | - | |
| Phac3g01715 | 1082 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 497 | 503 | IPR018303 | - | |
| Phac3g01715 | 1082 | Gene3D | - | 46 | 101 | - | - | |
| Phac3g01715 | 1082 | NCBIfam | calcium-translocating P-type ATPase, PMCA-type | 144 | 1066 | IPR006408 | GO:0005388|GO:0005524|GO:0016020|GO:0070588 | |
| Phac3g01715 | 1082 | FunFam | Calcium-transporting ATPase | 203 | 260 | - | - | |
| Phac3g01715 | 1082 | MobiDBLite | consensus disorder prediction | 1 | 18 | - | - | |
| Phac3g01715 | 1082 | FunFam | Calcium-transporting ATPase | 250 | 371 | - | - | |
| Phac3g01715 | 1082 | Pfam | E1-E2 ATPase | 274 | 473 | - | - | |
| Phac3g01715 | 1082 | SFLD | Haloacid Dehalogenase | 477 | 854 | - | - | |
| Phac3g01715 | 1082 | Gene3D | - | 179 | 371 | - | - | |
| Phac3g01715 | 1082 | FunFam | Calcium-transporting ATPase | 696 | 847 | - | - | |
| Phac3g01715 | 1082 | SFLD | p-type atpase | 477 | 854 | IPR044492 | - | |
| Phac3g01715 | 1082 | MobiDBLite | consensus disorder prediction | 1 | 27 | - | - | |
| Phac3g01715 | 1082 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 502 | 699 | IPR023299 | GO:0000166 | |
| Phac3g01715 | 1082 | CDD | P-type_ATPase_Ca_PMCA-like | 180 | 935 | - | - | |
| Phac3g01715 | 1082 | PRINTS | P-type cation-transporting ATPase superfamily signature | 717 | 727 | - | - | |
| Phac3g01715 | 1082 | PRINTS | P-type cation-transporting ATPase superfamily signature | 495 | 509 | - | - | |
| Phac3g01715 | 1082 | PRINTS | P-type cation-transporting ATPase superfamily signature | 695 | 706 | - | - | |
| Phac3g01715 | 1082 | PRINTS | P-type cation-transporting ATPase superfamily signature | 826 | 838 | - | - | |
| Phac3g01715 | 1082 | PRINTS | P-type cation-transporting ATPase superfamily signature | 319 | 333 | - | - | |
| Phac3g01715 | 1082 | PRINTS | P-type cation-transporting ATPase superfamily signature | 802 | 821 | - | - | |
| Phac3g01715 | 1082 | PRINTS | H+-transporting ATPase (proton pump) signature | 648 | 666 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
| Phac3g01715 | 1082 | PRINTS | H+-transporting ATPase (proton pump) signature | 834 | 859 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
| Phac3g01715 | 1082 | PRINTS | H+-transporting ATPase (proton pump) signature | 802 | 818 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
| Phac3g01715 | 1082 | SUPERFAMILY | HAD-like | 493 | 907 | IPR036412 | - | |
| Phac3g01715 | 1082 | Pfam | haloacid dehalogenase-like hydrolase | 492 | 816 | - | - | |
| Phac3g01715 | 1082 | Pfam | Cation transporter/ATPase, N-terminus | 150 | 219 | IPR004014 | - | |
| Phac3g01715 | 1082 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 151 | 1066 | IPR023298 | - | |
| Phac3g01715 | 1082 | Gene3D | - | 203 | 1056 | - | - | |
| Phac3g01715 | 1082 | Pfam | Cation transporting ATPase, C-terminus | 887 | 1064 | IPR006068 | - | |
| Phac3g01715 | 1082 | Gene3D | - | 492 | 847 | IPR023214 | - | |
| Phac3g01715 | 1082 | NCBIfam | HAD-IC family P-type ATPase | 769 | 882 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
| Phac3g01715 | 1082 | NCBIfam | HAD-IC family P-type ATPase | 434 | 518 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
| Phac3g01715 | 1082 | NCBIfam | HAD-IC family P-type ATPase | 240 | 410 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
| Phac3g01715 | 1082 | FunFam | Calcium-transporting ATPase | 45 | 101 | - | - | |
| Phac3g01715 | 1082 | FunFam | Calcium-transporting ATPase | 505 | 702 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Phac3g01715 | Phac-Chr3 | 19977873 | 19996337 | Dispersed/Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Phac3g01715 | 15 | 1082 | Primary Pumps ATPases | AT4G29900 | 69.804 | 0.0 | 1518 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Phac3g01715 | K01537 | - | gmx:100790157 | 1842.01 |