Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g01705 ATGGACAATATTGGTGAGGACTACGGCCATTTCGTTGACTCCTTCTTCCAAAACGAAGAGTTTGATAGCTGGGCAATGGATGAGACGGCGTTGTCCGGGTACTATGATTCAAGCTCTCCGGACGGTGGTGCTTCATCGGTGGCATCAAAGAACATTGTTTCGGAGAGGAATAGGAGGAAGAAGCTGAACGAAAGGCTCTTTGCGCTTAGAGCAGTGGTCCCCAATATCAGTAAGATGGATAAGGCTTCTATCATTAAGGATGCTATTGAATACATCCAGAACTTGCATGAGCAAGAGAAAAGAATCAAAGCTGAGATTTTGAATCTCGAATCTGGGAAGCTGAAAAACCCAACCTATGAATTTGATCAGGACCTGCCTGTTCTCCTCAGGTCTAAGAAGAAGAGAAGAGAACAGCTATTTGATTCCGGCACTTCAAGAAATTCCCCAATTGAATTAATTGAGCTGAGGGTTGCGTACATGAGAGAGAAGACGATTGTGGTGAACTTGACATGTAGTAAAAGGACAGACACAATGGTAAAACTGTGTGAGGTGTTCGAATCTTTAAACCTGAAGGTCATTACAGCCAATATCACTTCTTCTTCAGGAACACTTTTTAAGACAGTCTTCATTGAGGTTAGTCTCCCATTTTGCCCTTTTTCTAATTTTTAA 669 0.423 MDNIGEDYGHFVDSFFQNEEFDSWAMDETALSGYYDSSSPDGGASSVASKNIVSERNRRKKLNERLFALRAVVPNISKMDKASIIKDAIEYIQNLHEQEKRIKAEILNLESGKLKNPTYEFDQDLPVLLRSKKKRREQLFDSGTSRNSPIELIELRVAYMREKTIVVNLTCSKRTDTMVKLCEVFESLNLKVITANITSSSGTLFKTVFIEVSLPFCPFSNF* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g01705 222 FunFam Basic helix-loop-helix (BHLH) DNA-binding superfamily protein 43 112 - -
Phac3g01705 222 Pfam Helix-loop-helix DNA-binding domain 53 95 IPR011598 GO:0046983
Phac3g01705 222 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 46 95 IPR011598 GO:0046983
Phac3g01705 222 Gene3D - 48 122 IPR036638 GO:0046983
Phac3g01705 222 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 46 109 IPR036638 GO:0046983
Phac3g01705 222 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 42 211 - -
Phac3g01705 222 SMART finulus 52 101 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g01705 Phac-Chr3 19819686 19822513 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g01705 14 214 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G57150 63.415 4.09e-82 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac3g01705 HLH 2.5e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g01705 - - gmx:100803916 308.531