Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g01691 ATGAGGGATAGTGTGAAGAAGTCAAACGACAAAGGATCTAAAAAATTTGATCATTTGAAGGCACGTACGAAAGGGAAGAAGGATAAAGTGAAACTGGAATCAAAATCTCATACAAAAAATGTTGGCACTGATGTATCAAGGAAAAGAGTTATCTCTTCCCTCAAGATCAAAGGGCCACGTAAGGATTCTTCAGATAAGAAATTGATTACTGGACAAAAATTGCCTTTGAAGAACAAAAAATCTTCACAGAAGCCATCCTTGAAGTTACAAGGCAAAAAAGCTTCTCTTAGCTCTAGAAAAGAGGGGAAAGATGCTGATGGGGAGGTAAAGCTTAAAAAAATGAAGAGAAAGAGAAAGAAGAAAAGACAAAGGAATAATTTGGATCTTGATGATCCTTCACGCCTGCAGAGGAGAACACGGTATCTTTTAATCAAAATGAAGCTAGAGCAGAACCTTATTGATGCTTACTCTGGAGAAGGTTGGAAAGGTCAGAGTCGAGAAAAGATTAGGCCAGAAAAGGAGCTACAAAGAGCAAGGAAGCAAATTTTAAAATGTAGACTTGGTATTCGTGATGCCATTCGCCAGTTGGATTCTCTTGGTTCATTGAGTAGCGTTGAAGATTCTGCAATTGCTCCAGATGGATCTGGTTGTCATGAACATATATTCTGTGCTAAGTGCAAAGTGCGAGAAGAACCTCCATATAATGATGTTATACGATGCTATGGTACATGCAAGCGTGCTTTTCACCAAAAATGTGTGGACCCTCCTTTAGACACTGAAAATGTTCCTCCTGGAAGGCAGAACTGGTTTTGTAAATTTTGTGAATGTAAGATGGAAATATTGGAAGCTATGAATGCTCATCTTGGAACTCACTTCTCCTTGCACAGTGCTTGGCAGGATGTATTCAAAGAAGAGGCTGCTATACCTGATGGTGAGACTGCATTACTGAATCCTGAAGAAGAATGGCCGTCAGATGATTCTGAAGATGATGATTATGACCCAGAGAGGAAAGAAGACAGCCACAATATCAACATGGAAGGAACTAATGATAGTGCATCTGATGATTTAAGCAGTTCTACCAGTCTGTGTTATTCCGATGATGAATATTCTCCAGTAGATGGTGTCAGTCATGAATATCTTTTTGTCAATAGCAGCATAGATTCGGATGAGTCTGAGGACAAAGCCTGTGGGCGTAGGCAGCGAAAAGCTGTTGACTACAAGCAGCTTTATGATGAAATGTTTGGGAAGGAAGCTCCTGCATATGAACAATTGAGTGAAGATGAAGACTGGGGTCCTGGCAAAAGAAAGCGAAGGGAAAAGGAGTGTGATGCTGTTGATTCTCTTATGACTTTGCATGAAAGTGAGAATAAGCACCCCAATAATGAGCAAAACAACATGACAATAAAATATTCTTCTAGCACAAATATCAAGAGGCATTGTTTTAGGATTCCTCGTGATTCAGTTGAGAAGCTTCGCCAAGTTTTTGCTGTGAATGAACTTCCTCCAAGATCTATTAGAGAGGATCTTTCAAAAGAACTGGGACTTGACACTGAGAAGGTCAGCAAATGGTTCAAAAATGCACGTTACTTGGCGCTTAAAAACAGAAAGCATCAAGCAGAAGGAGCAGCAAATCAACTTAAGAGAATCACTTCCACAGAGAACTCCAGATTACAAAATCAGGAGAATACTGATCTTTTGAAATCAAAGACCTTGAAAATTACAAGTCATTCCGAGAAGGATGTTAAAAATGTCAGTGGAAGAAAGAAAATTAAGTTTTCTAGCAAGAAAAGACAACCAGAAATTCCTCCACCTCCAGGAGAAAATGGCAACAAGGACTTAATGGAGATCAGTGATGATGTGAGCTTGAAGAAACTATTGAAGAAAAGAAAGAAGAGGTTGGTAAGTTTTACATTTGAAGGAGATTCTCAGACGGCAGAGTTGGAATTTGAAAGACTATGCAAATTGAAGCAAAAACTAGTTAGTATGAAGCAAAAATTAACAACAATTCAAAGTTTCAGAGTAAAGGGTTCAGATGAACCCCATTCTAATGAACCATCCATTGTATATGTACCCACAGCTGTTTTAAGGGAAAAATTTGAATGA 2103 0.388 MRDSVKKSNDKGSKKFDHLKARTKGKKDKVKLESKSHTKNVGTDVSRKRVISSLKIKGPRKDSSDKKLITGQKLPLKNKKSSQKPSLKLQGKKASLSSRKEGKDADGEVKLKKMKRKRKKKRQRNNLDLDDPSRLQRRTRYLLIKMKLEQNLIDAYSGEGWKGQSREKIRPEKELQRARKQILKCRLGIRDAIRQLDSLGSLSSVEDSAIAPDGSGCHEHIFCAKCKVREEPPYNDVIRCYGTCKRAFHQKCVDPPLDTENVPPGRQNWFCKFCECKMEILEAMNAHLGTHFSLHSAWQDVFKEEAAIPDGETALLNPEEEWPSDDSEDDDYDPERKEDSHNINMEGTNDSASDDLSSSTSLCYSDDEYSPVDGVSHEYLFVNSSIDSDESEDKACGRRQRKAVDYKQLYDEMFGKEAPAYEQLSEDEDWGPGKRKRREKECDAVDSLMTLHESENKHPNNEQNNMTIKYSSSTNIKRHCFRIPRDSVEKLRQVFAVNELPPRSIREDLSKELGLDTEKVSKWFKNARYLALKNRKHQAEGAANQLKRITSTENSRLQNQENTDLLKSKTLKITSHSEKDVKNVSGRKKIKFSSKKRQPEIPPPPGENGNKDLMEISDDVSLKKLLKKRKKRLVSFTFEGDSQTAELEFERLCKLKQKLVSMKQKLTTIQSFRVKGSDEPHSNEPSIVYVPTAVLREKFE* 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g01691 700 ProSiteProfiles 'Homeobox' domain profile. 474 534 IPR001356 GO:0003677
Phac3g01691 700 SMART PHD_3 222 275 IPR001965 -
Phac3g01691 700 PANTHER POLYCOMB-LIKE TRANSCRIPTION FACTOR 3 698 - -
Phac3g01691 700 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 164 286 IPR013083 -
Phac3g01691 700 CDD PHD_PRHA_like 222 274 IPR045876 -
Phac3g01691 700 Pfam PHD-finger 222 277 IPR019787 -
Phac3g01691 700 CDD homeodomain 477 538 IPR001356 GO:0003677
Phac3g01691 700 MobiDBLite consensus disorder prediction 1 132 - -
Phac3g01691 700 FunFam pathogenesis-related homeodomain protein 476 540 - -
Phac3g01691 700 MobiDBLite consensus disorder prediction 75 93 - -
Phac3g01691 700 ProSitePatterns Zinc finger PHD-type signature. 223 274 IPR019786 -
Phac3g01691 700 MobiDBLite consensus disorder prediction 345 363 - -
Phac3g01691 700 MobiDBLite consensus disorder prediction 319 333 - -
Phac3g01691 700 MobiDBLite consensus disorder prediction 1 17 - -
Phac3g01691 700 MobiDBLite consensus disorder prediction 94 111 - -
Phac3g01691 700 SUPERFAMILY FYVE/PHD zinc finger 214 280 IPR011011 -
Phac3g01691 700 MobiDBLite consensus disorder prediction 544 570 - -
Phac3g01691 700 SMART HOX_1 476 538 IPR001356 GO:0003677
Phac3g01691 700 MobiDBLite consensus disorder prediction 571 587 - -
Phac3g01691 700 ProSiteProfiles Zinc finger PHD-type profile. 220 277 IPR019787 -
Phac3g01691 700 Pfam Homeodomain 485 529 IPR001356 GO:0003677
Phac3g01691 700 MobiDBLite consensus disorder prediction 26 44 - -
Phac3g01691 700 MobiDBLite consensus disorder prediction 314 363 - -
Phac3g01691 700 Gene3D - 477 547 - -
Phac3g01691 700 SUPERFAMILY Homeodomain-like 477 539 IPR009057 -
Phac3g01691 700 MobiDBLite consensus disorder prediction 536 613 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g01691 Phac-Chr3 19742184 19747820 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g01691 125 539 Homeobox Transcription Factor Family AT4G29940 55.504 3.56e-146 443
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-PHD Phac3g01691 Homeodomain 9.4e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g01691 - - gmx:100817639 1090.49