Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g01670 ATGAAGCTATTTGGTTTCTCCTTCAACTTGAAGCCTGCCATATCCTGTGAAGATGGTGCAAAGAGGTTCCATTGCCGATACTGTCGCCGCCAATTCACAAATTCTCAAGCACTTGGAGGACACCAAAATGCTCACAGGAGGGAACGTGCTAAGTTAGCCCAGTTCAAATACCTTCTACATCTTCGCCAACACCATGGCCATAGCTTCAAACCACCATCCAACAATGGAGCAAAAGGGTCTTCGCTTCATCATCCAAATGGCTCACCCAACGTTAGTGTTGGTAGTGCAACTAGTGCCGCTTCGTTTCAATTTCACGGTGCAGGGACACTGCTCCTGCAAGTACCACCGCGTGACGATCACGTGGATCTCAACCTCAGACTCTAG 384 0.487 MKLFGFSFNLKPAISCEDGAKRFHCRYCRRQFTNSQALGGHQNAHRRERAKLAQFKYLLHLRQHHGHSFKPPSNNGAKGSSLHHPNGSPNVSVGSATSAASFQFHGAGTLLLQVPPRDDHVDLNLRL* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g01670 127 PANTHER ZINC FINGER PROTEIN GIS 17 68 IPR044291 GO:0003700|GO:0009739|GO:0010026|GO:0010090
Phac3g01670 127 ProSitePatterns Zinc finger C2H2 type domain signature. 25 45 IPR013087 -
Phac3g01670 127 ProSiteProfiles Zinc finger C2H2 type domain profile. 23 50 IPR013087 -
Phac3g01670 127 MobiDBLite consensus disorder prediction 65 95 - -
Phac3g01670 127 MobiDBLite consensus disorder prediction 68 95 - -
Phac3g01670 127 SUPERFAMILY beta-beta-alpha zinc fingers 19 50 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g01670 Phac-Chr3 19482853 19483321 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g01670 13 71 C2H2 Transcription Factor Family AT1G24625 47.458 4.00e-12 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac3g01670 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g01670 - - vra:106766530 211.075