Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g01629 ATGTGTGGGGGTGCTATCATTTCTGATTTCGTAGACGTGGGTATCAAGAATGGTGCAGTGGAGGACGCATGTGAGAGGGTGAAGAAGAAAAGAGTGGTTGCAGAGAAGGGTGGTGCGCGAGTACGGAAGAACGCGTACAGAGGAATCAGGCAAAGGCCTTGGGGCAAGTGGGCTGCAGAAATAAGGGACCCACGCAAGGGTGTGCGCCTGTGGCTCGGCACATTCGCCACTGCCCAAGAAGCCGCTCGCGCCTACGACGCCGCCGCCGTGCGCATCCGCGGAGACAAGGCCAAGCTCAACTTCCCCCGCCACCACCTCCCACCCAACAACAACCCATGCCTCAGCCCCGAGTTGACTCAGCCCTGTTATCAACCCACTTTTAATAACAGCGACCCTCCACTCGCGCACCATATTTCCAACCTCGAATCGTTTCTTGGTTTGGAGCATGAGCAGCTTCCGATGCAGCCACTGCCACTTCCTGAGTGGGACCCGCTCAACGACGTCGTTTTTCCCAACCGCCACCTCTTCTGA 531 0.5744 MCGGAIISDFVDVGIKNGAVEDACERVKKKRVVAEKGGARVRKNAYRGIRQRPWGKWAAEIRDPRKGVRLWLGTFATAQEAARAYDAAAVRIRGDKAKLNFPRHHLPPNNNPCLSPELTQPCYQPTFNNSDPPLAHHISNLESFLGLEHEQLPMQPLPLPEWDPLNDVVFPNRHLF* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g01629 176 Gene3D AP2/ERF domain 45 103 IPR036955 GO:0003700|GO:0006355
Phac3g01629 176 ProSiteProfiles AP2/ERF domain profile. 45 102 IPR001471 GO:0003700|GO:0006355
Phac3g01629 176 SMART rav1_2 45 108 IPR001471 GO:0003700|GO:0006355
Phac3g01629 176 SUPERFAMILY DNA-binding domain 45 103 IPR016177 GO:0003677
Phac3g01629 176 Pfam AP2 domain 46 94 IPR001471 GO:0003700|GO:0006355
Phac3g01629 176 FunFam Ethylene-responsive transcription factor 2 44 103 - -
Phac3g01629 176 PRINTS Ethylene responsive element binding protein signature 68 84 IPR001471 GO:0003700|GO:0006355
Phac3g01629 176 PRINTS Ethylene responsive element binding protein signature 46 57 IPR001471 GO:0003700|GO:0006355
Phac3g01629 176 CDD AP2 46 102 IPR001471 GO:0003700|GO:0006355
Phac3g01629 176 PANTHER DNA-BINDING DOMAIN 39 112 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g01629 Phac-Chr3 18703709 18704832 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g01629 1 106 AP2-EREBP Transcription Factor Family AT2G47520 62.727 1.00e-41 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac3g01629 AP2 3.7e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g01629 K09286 - gmx:100779626 143.28