Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g01628 ATGAATTCCAACTACGGCCAATCCAACACGAACAAATCCCCCTCCGTGTCCCTCAACAACTTGAATTTCGATTTCGATCTTGGCATCGGATCCAACCGTCCCAAATCCCTCAACGACCAGAAAAACCCCAAACCTTCCTATTCCACCACCACCACCACCTCTTCCTACTCCTATCCATATTCCTCCGCCCAGCCCAACAAAAAACCCTCATGGACCCACCAACCGGCTCCCACTCAGACCACCTCCCTGCCCGGTGGGCCCCCCTCCATGGTCGGAGACATCTTCGGCAAGAGCTGGGGAACCACTCAACCTTCTACTGCTTCCAAAAACATTGGGATCATTAATAAGAACCCTAATCTCTTCGGAGATTTGGTCAGTTCTGCTTTGGGCCAGGGTTCCAAGTCTCCTGCTACCAATGTTCCTCTCAAAAACGCTACCCCCACCCCCAATAAAGCCTCCTTTTCCATGGGAAACATGGCCGATTCTTTGCCCAAAACTGGTGCCACGCCACAGAGCAGTGCTAGTTGGGCATCATCTTCTGGGGGGTTTAGCGTGAATGCCAACAAAACCCCCAATCTTGGGGGTACTTCAATGCGAAACATGGGTAGTGGAATTGGAACCAGTTCTAATAACAAGGATCCTTTTAGTTCTTTGTCTGGTTTTGGATCCAAGCAGTCTGCTACTCTTAATTCAGCTGCCAAAGGGCCGAAGGTTGCATCCGGGGATGATGGTTTTGGAGATTTCCAAAATGCTTCCAAATCGAGCTCGGATGGTTTTGGAGATTTTCAAAATGCTTCCAAATCGAGCTCGGATGGTTTTGGAGATTTTCAAAATGCTTCAAAACCGAGCTCAGCCGCGTTTCCATCGGCTGCTTCTCCTGGGATTGATATCAATTTTGCTGGATCTGCCGCTCCCACTCAGAGTCATGTTCAGAGATCAGGTGGTGGTGATGATCCAATGGACATGTTTTTCACGGCTTCCTCGCCCGCGGTTGGGGGTGCTGCTGCGGCCTCTGATGGATTTGGAGGACAGGACGATTGGGGTTTGGATTCGGAGTTTGGTGGGGGAGGCCATGATGTGGGTGGCACCACTACTGAGCTTGAGGGGCTGCCTCCTCCTCCTGCCGGGGTCTCTGTTTCCACTGCTAAAGGCAAGGGGATGGACAATTACAAGCAGGGACAGTTTGCTGATGCTATTAAGTGGTTTTCGTGGGCCATTGTTCTTCTGGAGAAATCTGGGGATGATACGGCCACAGCGGAGGTTTTGTCATCCAGATCTTCGTGTTACAAAGAAGTCGGGGAGTATAAAAAGGCAGTGGCAGATTGTACAAAGATTCTTCAAAATGATGAAACCAATGTATCTGTCCTGGTACAGCGTGCTCTCTTGTACGAGAGTATGGAAAAGTACAAACTTGGTGCTGAAGACCTTAGGACTGTGCTGAAGATTGATCCTAGTAATAGGATCGCCAGAAGCACCGTTCACCGGTTGGCTAAGATGGCTGAGTAG 1506 0.5 MNSNYGQSNTNKSPSVSLNNLNFDFDLGIGSNRPKSLNDQKNPKPSYSTTTTTSSYSYPYSSAQPNKKPSWTHQPAPTQTTSLPGGPPSMVGDIFGKSWGTTQPSTASKNIGIINKNPNLFGDLVSSALGQGSKSPATNVPLKNATPTPNKASFSMGNMADSLPKTGATPQSSASWASSSGGFSVNANKTPNLGGTSMRNMGSGIGTSSNNKDPFSSLSGFGSKQSATLNSAAKGPKVASGDDGFGDFQNASKSSSDGFGDFQNASKSSSDGFGDFQNASKPSSAAFPSAASPGIDINFAGSAAPTQSHVQRSGGGDDPMDMFFTASSPAVGGAAAASDGFGGQDDWGLDSEFGGGGHDVGGTTTELEGLPPPPAGVSVSTAKGKGMDNYKQGQFADAIKWFSWAIVLLEKSGDDTATAEVLSSRSSCYKEVGEYKKAVADCTKILQNDETNVSVLVQRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTVHRLAKMAE* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g01628 501 MobiDBLite consensus disorder prediction 1 26 - -
Phac3g01628 501 ProSiteProfiles TPR repeat profile. 453 486 IPR019734 GO:0005515
Phac3g01628 501 MobiDBLite consensus disorder prediction 33 86 - -
Phac3g01628 501 MobiDBLite consensus disorder prediction 247 287 - -
Phac3g01628 501 MobiDBLite consensus disorder prediction 232 374 - -
Phac3g01628 501 Gene3D Tetratricopeptide repeat domain 378 500 IPR011990 GO:0005515
Phac3g01628 501 Pfam Tetratricopeptide repeat 454 486 IPR019734 GO:0005515
Phac3g01628 501 PANTHER OS03G0340700 PROTEIN 1 501 - -
Phac3g01628 501 SMART tpr_5 419 452 IPR019734 GO:0005515
Phac3g01628 501 SMART tpr_5 379 412 IPR019734 GO:0005515
Phac3g01628 501 SMART tpr_5 453 486 IPR019734 GO:0005515
Phac3g01628 501 MobiDBLite consensus disorder prediction 131 211 - -
Phac3g01628 501 MobiDBLite consensus disorder prediction 1 88 - -
Phac3g01628 501 SUPERFAMILY TPR-like 382 491 IPR011990 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g01628 380 501 Calmodulin-binding Proteins AT3G25230 30.303 4.98e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g01628 - - pvu:PHAVU_003G107800g 902.894