Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g01623 ATGGCAGGTGGTGGATTCGACAGCGTCCATGAGAAGAAGAAGAGGCTCGCCATTCTGACCGTGTCCTCCGTTCTCCTTGTGGCGATGGTTGCCGCGGTAGCCGTTGGCATAAGAGACAACGTCGAGATCGCCGAGGAAGGAGGCGACAGCGGCATCGTGAAATCTCAGAGGAACGTGAAAGTGATATGTCAATCCGCCGAATACAAAGAAACCTGCCAGAAGAGTCTTGAGAAGGCTTCCGATGAAAACAGTGACCTGAAGCAGCTTATCATTACGGCCTTCAACGCCACCGCCGAGGAGATTCGCAGCAAAATTAAAAACTCAACGCTCTTCCAGGAGTTGGCCACCGACAACATGACCAAACAGGCCATGGAAATTTGCCAGGAAGTCCTCGGTTACGCTGTGGATGATATAAACAAATCCTCTGCCACCTTGGAGAAGTTTGACCTAAGCATGTTGAACGAGTACGCCTATGACCTCAAGGTTTGGATCGCGGGTACCCTTGCCCACCAGCAAACATGCTTGGACGGGTTCAATCACACCACTACCGAGGCTGGGAAGACTATGGCTAGGGTTCTGAACGCGTCACTGGAGATGAGCCACAACGCGTTGGACATAGTGAACGGTGCGTCAGCTCTCTTCAAGGGTCTTAACTTGACCTCGTTCACCGCCAGCAACAGGAAGCTTCTCTCGGAAGAGCCTTTGGTTGATGGGTTCCCTTCGTGGGTGACTGAAGGGCAGAGAAAGATTCTGGAAGATGCTAATCCCAAACCCGACGTCGTGGTGGCTCTGGATGGGAGTGGACAGGTGACGAAAATCCACGAGGCTCTCAAACTGGTGCCTAAGAATAACAAGAAGCCTTTTGTTATTTACATCAAGGCCGGTATCTATCAGGAGTATGTTAGATTGAACAAGCACATGTCCTTTGTCACCATGATCGGTGATGGCCCCACCCGCACCAGAATCACCGGCAACAAAAACTACGTCGATGGCGAACAGACCTACAACACCGCAACCTTCGGTGCGAACGCTGCAAACTTCATGGCGAAGAACATTGGGTTCGAGAACTCGGCAGGAGCAGAGAAGCACCAAGCAGTGGCTCTGAGGGTAACAGCTGACAAGGCAGTGTTCTACAACTGTCACATGGACGGCTACCAAGACACCCTCTATACCCAGTCCCAGCGCCAGTTCTACCGCGACTGCACCGTCAGCGGCACAATCGACTTTGTCTTCGGTGACGCCGTCGCCGTTTTCCAAAACTGCAAGTTCATTGTGAGGAAGCCCATGGAGAACCAGCAGTGCATGGTCACCGCCGGCGGAAGGAGCAAGATCGACAGCCCCAGCGCCCTGGTCTTCCAGAGCTGCACCTTCACCGGCGAGCCCGACCTCGTGGCCTTCACCCCCAAGATCTCCTACCTCGGGAGGCCCTGGAGGATTTACTCGAAGGTGGTGATAATGGACTCTCAAATCGATGACATCTTCGTCCCCGAAGGGTACATGCCCTGGATGGGAAGCGCCTTCAAAGATACCTGCACCTACTACGAGTTCAACAACAGGGGTCCTGGTGCTAACACCGCTGGAAGAATCACATGGCCAGGTTTTAAGGTCATTAACCCTACTGAGGCTGCTGAGTACTACCCTGGAAAGTTCTTTGAGATTGCCAACTCCACTGATCGTGACGCTTGGATTCTTGAATCTGGGGTGCCCTATTCCCTTGGCTCACTTCCATCATCAACCGCTATGCCTGCAGTTTAA 1755 0.5293 MAGGGFDSVHEKKKRLAILTVSSVLLVAMVAAVAVGIRDNVEIAEEGGDSGIVKSQRNVKVICQSAEYKETCQKSLEKASDENSDLKQLIITAFNATAEEIRSKIKNSTLFQELATDNMTKQAMEICQEVLGYAVDDINKSSATLEKFDLSMLNEYAYDLKVWIAGTLAHQQTCLDGFNHTTTEAGKTMARVLNASLEMSHNALDIVNGASALFKGLNLTSFTASNRKLLSEEPLVDGFPSWVTEGQRKILEDANPKPDVVVALDGSGQVTKIHEALKLVPKNNKKPFVIYIKAGIYQEYVRLNKHMSFVTMIGDGPTRTRITGNKNYVDGEQTYNTATFGANAANFMAKNIGFENSAGAEKHQAVALRVTADKAVFYNCHMDGYQDTLYTQSQRQFYRDCTVSGTIDFVFGDAVAVFQNCKFIVRKPMENQQCMVTAGGRSKIDSPSALVFQSCTFTGEPDLVAFTPKISYLGRPWRIYSKVVIMDSQIDDIFVPEGYMPWMGSAFKDTCTYYEFNNRGPGANTAGRITWPGFKVINPTEAAEYYPGKFFEIANSTDRDAWILESGVPYSLGSLPSSTAMPAV* 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g01623 584 Coils Coil 69 89 - -
Phac3g01623 584 ProSitePatterns Pectinesterase signature 2. 403 412 IPR033131 -
Phac3g01623 584 CDD PMEI-like_3 62 212 - -
Phac3g01623 584 Gene3D - 257 575 IPR012334 -
Phac3g01623 584 SMART PMEI_2 54 206 IPR006501 GO:0004857
Phac3g01623 584 Pfam Pectinesterase 259 551 IPR000070 GO:0030599|GO:0042545
Phac3g01623 584 PANTHER PECTINESTERASE 23 563 - -
Phac3g01623 584 FunFam Pectinesterase 4 256 574 - -
Phac3g01623 584 SUPERFAMILY Pectin lyase-like 256 570 IPR011050 -
Phac3g01623 584 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 59 208 IPR035513 -
Phac3g01623 584 Gene3D Invertase/pectin methylesterase inhibitor family protein 53 210 IPR035513 -
Phac3g01623 584 NCBIfam pectinesterase inhibitor domain 54 208 IPR006501 GO:0004857
Phac3g01623 584 Pfam Plant invertase/pectin methylesterase inhibitor 59 206 IPR006501 GO:0004857
Phac3g01623 584 ProSitePatterns Pectinesterase signature 1. 284 303 IPR018040 -
Phac3g01623 584 FunFam Pectinesterase 55 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g01623 Phac-Chr3 18652407 18654626 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g01623 5 584 Carbohydrate Esterase AT3G05610 44.237 0.0 535