LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac3g01557	ATGGACTGCAATAAAGAAGAGGCCTTGAGGGCCAAGGACATTGCTGAAAAGAAGATGGAAAACAGGGATTTTGTGGGGGCCCGGAAAATTGCTCTGAAGGCTCAGCAGCTGTACCCTGATCTGGAAAATATTGCTCAAATGCTTGTTGTTTGTGATGTGCACTGCTGTGCTGAGAAGAAATTGTTTGGTAATGAGATGGATTGGTATGAAATTCTTCAGGTTGAACAGACAGCTGTTGATGCACTAATTAAGAAGCAATATAAAAAGTTCGCCCTCCAACTCCATCCTGACAAAAACAAGTTTGCTGGTGCTGAAGCCGCATTTAAGCTGATTGGGGAAGCTCAAAGAGTACTTTTGGACAGAGAAAAACGTTATCATTTTGACGTGAAGCGAGGAGTTACAGTGAACAAACCTGCTACATCACACTTTAGTACTACGGTGTGTAGGAATGTTAGGCCCAACTTTACAAGCTCAACTTCTCAGCAGCAGCAGCCATCTAGGCAGCCAATGCAGCAGCAGCCATCTAGGCAGCCAATGCAGCAGCAGCAATCTAGGCAGTCAATGCAGCAGCAGCAATCTAGGCAGTCAATGCAGCAGCAGCAAAATGGTGTACGCCCAACTTTTTGGACAGTCTGCCCATTTTGTTCAGTTAGGTATCAATATTACAAAGAAATTTTAAATAAAACTCTTCGCTGTCAAAATTGTAAAAGGCCCTTTGTTGCATATGAAGTGGAAAAACAAGGTACACCATCACCAGCAACTAATTCAAGTCAGAAAGCTTATGACCAGCAGAAAGGTGGTTTGAATCAAGGTTCTTTTAAGGTAGGTGCTGGATCTCAAGGCAATTCACATGCTGAGAAGTCCAATACAGGGTCTGATAAGAAGGGACCTGCTAGTGTTTCTGGAGAACTTAATGGAAGGAGAAAAAGGAAGCAGGTGGCAGAATCCAGTGAAAGTTCTGACCAGCAGAAAGGTGTTTTGAATCATGGTTCTTTCAAGGTAGGTGCTGGATCTCAAGGCAATTCACATGCTGAGAAGTCCAATACACGGTCAACTGATAAAAAGGAACCTGCTAGTGTTTCTGGAAAACTTAATGGAAAGAGAAAAAGGAAGCAAGTGGCAGAATCCAGTGAAAATTCTGATCCTTTGAGTGAAAGTGATTCCGAAAAAGATAGAGTTGCTGGAAAGGGTGGTTATTCCAGTGTAGAAAACCATTCAACTTCTAGAGAAGGGCAGCCACGCAGATCTACCCGGAAGAGGCATCAGGGTTCCTACAAGGAGAATGTGAACAACAATGATGATGGGTTCTCAGAACGATGTGGTGATGGTGAGGCCCATGGTGAGAAAAGTAAAATGAATGATCAGAATGGTTTAGCTGCTGCACACAAAGAAGTAAATCAGAAACAACACTTGTATTCGGAAAGGAATGAGGAAACTAACATGTCTAAGGGAAAAGATGTTGCAGGAGGGTCAAAGCAGATGGATGAAACCTCAGAGCATTCTCCAGATTTAACCTCCAAAGTATCAAATCAACCAAATGTTTATGTCTTCCCTGATGCAGAGTTCGGTGATTATGACAAAGATAAGAGAAAAGAATGTTTTGCTGCTGGGCAGATATGGGCTGTTTATGACACATCAGAAGGTATGCCTAGATTCTATGCTTTAATCAGGAAAGTTCTGTCTCCTGGATTCAAACTGCAGATAACATGGTTTGAATCACATCCTGACTGGAAGGATGAAATCAAGTGGGTGAACGAGGAATTGCCTGTTGCTTGTGGGAAATATAAACTTGGTGACACTGACGTCACTGAAGATCATCTGATGTTCTCTCATCTGGTTTTGTGTGAAAAAGTTAGCCGTACTACTTTTAAAGTGTATCCTAGAAAGGGAGAAACTTGGGCCCTTTTTAAAAATTGGGATATTAAGTGGTACATGGATGTGAAATCTCACCAGCGGTATGAATATGAGTTTGTTGAAATCTTGACAGATTATGATGAAGATGAGGGTGTATATGTTGTTTACTTGACTAAGTTGAAAGGTTTTGTAAGTCTCTTCCTTCAAAGTATAAAGGAAGCCAAAAAATCATTTCAAATTCCACCACTGGAGTTATTTAGATTCTCTCACAGGATTCCATCTTTCAAAATGACTGGTGAGGAAAGGGCTGGTGTACCTACAGGATCTTATGAACTTGATCCTGGAGCTTTGCCAGTAAATTTTGAAGAGGGTCACGATGCATCTGGTGGTGAGAATACAGGGACTTCAGATAGATCAGAACCCCTGATGACATCTGAGAGAGGTAGGTCCATTCCCAAGGATAATTTGGAAGGAAGCATTTTGGTGAGAGAGAACAAGGATTCTGTTGATAACAGCGATGATTGTTGTGCTCCTCCAGCACCCAGATCTAAAACAATTGAAATTCCAGATACTCAATTCTTTAATTTTGATGCTGGGAGGTCCCTTGAGAAGTTTCAGATTGGTCAAATTTGGGCATTTTACAGTGACGAGGATGGATTGCCAAAATACTACGGTCACATTAATAAGATTGTGACAAGTCCAGATCTTGAATTACACGTTTCCTGGCTTACTTGCTACTGGCTACCAGAGAATACCACTGAATGGGAGGACAAAGATATGGGTATGCTTATTTCATGCGGCCGATACAAAGTTAATAAAACAGATGAATTTCTCAGTATTTATAGTACTACCTCTTCTGTTTCACATCAAGTGCATGCTGATGCTGTTGGAAAGAATAACAATTATGCCATCTTTCCGAGGAAAGGTGAAGTTTGGGCGTTATATAGAAAATGGACAAATAAAATGAAATGTTCTGAGTTGAAAAAATGGGAGTATGACATAGTGGAAGTTATTGAAGAAACTGATTTGTTCATTAATGTTGTAGTTCTGGAGTTTGTCAGTGGGTTTAGTTCCGTTTACAGGGGCAAATCAAATGAAGGATCATCTGTCAACCTGAGAATACCAAAAAAAGAGTTGCTTAGGTTCTCCCACCAAATCCCAGCTTTCAAACTGACAGAAGAGCATGGCAAACTGAGAGACTTCTGGGAACTTGATCCGGGTGCGCTACCAATTCATTGTTATGGCTTGAGATGA	3108	0.4122	MDCNKEEALRAKDIAEKKMENRDFVGARKIALKAQQLYPDLENIAQMLVVCDVHCCAEKKLFGNEMDWYEILQVEQTAVDALIKKQYKKFALQLHPDKNKFAGAEAAFKLIGEAQRVLLDREKRYHFDVKRGVTVNKPATSHFSTTVCRNVRPNFTSSTSQQQQPSRQPMQQQPSRQPMQQQQSRQSMQQQQSRQSMQQQQNGVRPTFWTVCPFCSVRYQYYKEILNKTLRCQNCKRPFVAYEVEKQGTPSPATNSSQKAYDQQKGGLNQGSFKVGAGSQGNSHAEKSNTGSDKKGPASVSGELNGRRKRKQVAESSESSDQQKGVLNHGSFKVGAGSQGNSHAEKSNTRSTDKKEPASVSGKLNGKRKRKQVAESSENSDPLSESDSEKDRVAGKGGYSSVENHSTSREGQPRRSTRKRHQGSYKENVNNNDDGFSERCGDGEAHGEKSKMNDQNGLAAAHKEVNQKQHLYSERNEETNMSKGKDVAGGSKQMDETSEHSPDLTSKVSNQPNVYVFPDAEFGDYDKDKRKECFAAGQIWAVYDTSEGMPRFYALIRKVLSPGFKLQITWFESHPDWKDEIKWVNEELPVACGKYKLGDTDVTEDHLMFSHLVLCEKVSRTTFKVYPRKGETWALFKNWDIKWYMDVKSHQRYEYEFVEILTDYDEDEGVYVVYLTKLKGFVSLFLQSIKEAKKSFQIPPLELFRFSHRIPSFKMTGEERAGVPTGSYELDPGALPVNFEEGHDASGGENTGTSDRSEPLMTSERGRSIPKDNLEGSILVRENKDSVDNSDDCCAPPAPRSKTIEIPDTQFFNFDAGRSLEKFQIGQIWAFYSDEDGLPKYYGHINKIVTSPDLELHVSWLTCYWLPENTTEWEDKDMGMLISCGRYKVNKTDEFLSIYSTTSSVSHQVHADAVGKNNNYAIFPRKGEVWALYRKWTNKMKCSELKKWEYDIVEVIEETDLFINVVVLEFVSGFSSVYRGKSNEGSSVNLRIPKKELLRFSHQIPAFKLTEEHGKLRDFWELDPGALPIHCYGLR*	1036

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac3g01557	1035	MobiDBLite	consensus disorder prediction	152	202	-	-
	Phac3g01557	1035	MobiDBLite	consensus disorder prediction	739	768	-	-
	Phac3g01557	1035	Pfam	DnaJ domain	67	128	IPR001623	-
	Phac3g01557	1035	SUPERFAMILY	Chaperone J-domain	63	130	IPR036869	-
	Phac3g01557	1035	SMART	dnaj_3	66	123	IPR001623	-
	Phac3g01557	1035	MobiDBLite	consensus disorder prediction	248	296	-	-
	Phac3g01557	1035	CDD	DnaJ	67	120	IPR001623	-
	Phac3g01557	1035	Pfam	Domain of unknown function (DUF3444)	513	719	IPR024593	-
	Phac3g01557	1035	Pfam	Domain of unknown function (DUF3444)	801	1012	IPR024593	-
	Phac3g01557	1035	MobiDBLite	consensus disorder prediction	437	451	-	-
	Phac3g01557	1035	PRINTS	DnaJ domain signature	69	87	IPR001623	-
	Phac3g01557	1035	PRINTS	DnaJ domain signature	87	102	IPR001623	-
	Phac3g01557	1035	PRINTS	DnaJ domain signature	103	123	IPR001623	-
	Phac3g01557	1035	Gene3D	DnaJ domain	55	147	IPR036869	-
	Phac3g01557	1035	MobiDBLite	consensus disorder prediction	471	510	-	-
	Phac3g01557	1035	MobiDBLite	consensus disorder prediction	246	451	-	-
	Phac3g01557	1035	MobiDBLite	consensus disorder prediction	347	376	-	-
	Phac3g01557	1035	ProSiteProfiles	dnaJ domain profile.	67	131	IPR001623	-
	Phac3g01557	1035	PANTHER	DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED	1	1028	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac3g01557	Phac-Chr3	17898781	17903353	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac3g01557	4	128	SUVH1 or 3-interacting DNAJ domain-containing protein superfamily	AT2G01710	43.077	4.36e-22	97.4

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac3g01557	-		-	vun:114177826	1582.39