Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g01540 ATGCAAGGTCACATTACAGAAAAGGAAACTGAAACTCACTCTACCATGCCACCGCTCTCTCAAATCCCACCTTCTTCTTTTCTTCACCCTTCAACCATTGCTGAAAACACTGCTAACACCACCTCCAGAAAGCGTGTTAAGAGAATAATGGGTCAGACCAATTGCGAGAGCCTTAACATGGAACGTGAAAGAAGGTCCAAGATGACTCAAATGTTCACTCAGCTTCAAACCTCGGTCCCCGGTCTCTTACCTCAGGCTACAAGAGAAGTGATAATAAACGAGACAATTGGGTACATAAAAGAGCTTGAGAAGAAGAAGCAGAGACTAGAGGAGTTGAAGGAGACTATGAAAGGAATAGAAGAAGGGTCCACGGTTGAATGTGGTAACAACAGTAGAAATTGTTCAATCATGGTTACTGTTTCTGCTAATGTTGCATTCTTTGGTATTCAATGGGTGCCTCGACCAGGTTTGGTGACACAAATTTTAAAGGTGTTTTGCAATCACCAAGCAGAGATTTTGGCTGCAAATGTGTCTGTTAATAATGGGAAATTGATTTTGGCAATCACAGCTTTGGTGCAAAATAATGGAAAATGTGTGGTTGAAAATATTAAAAGAGAAATTATGGGTTTGTAG 633 0.4076 MQGHITEKETETHSTMPPLSQIPPSSFLHPSTIAENTANTTSRKRVKRIMGQTNCESLNMERERRSKMTQMFTQLQTSVPGLLPQATREVIINETIGYIKELEKKKQRLEELKETMKGIEEGSTVECGNNSRNCSIMVTVSANVAFFGIQWVPRPGLVTQILKVFCNHQAEILAANVSVNNGKLILAITALVQNNGKCVVENIKREIMGL* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g01540 210 Pfam Helix-loop-helix DNA-binding domain 60 103 IPR011598 GO:0046983
Phac3g01540 210 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 59 116 IPR036638 GO:0046983
Phac3g01540 210 SMART finulus 58 108 IPR011598 GO:0046983
Phac3g01540 210 MobiDBLite consensus disorder prediction 1 43 - -
Phac3g01540 210 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 35 193 - -
Phac3g01540 210 Gene3D - 56 118 IPR036638 GO:0046983
Phac3g01540 210 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 52 102 IPR011598 GO:0046983
Phac3g01540 210 Coils Coil 92 122 - -
Phac3g01540 210 MobiDBLite consensus disorder prediction 12 43 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g01540 24 110 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G49770 37.634 2.12e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g01540 - - gmx:102670256 273.863