Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g01523 ATGTCAACCTCTAGAACCTCAGATACACCCTTCAAAGGATATGATCCCAACCAAACTCAAATGTGTCTCTCTCTTCTCCAACGCAACACATCTCCTTGTGGTGAGAGAAGAGGCAGAAGGAAGCAAGCAGAGCCAGGAAGGTTCCTCGGGGTAAGGAGGCGCCCCTGGGGTCGATATGCTGCTGAAATCAGAGACCCCACAACCAAAGAAAGGCATTGGCTTGGCACATTTGACACTGCTCAAGAAGCAGCTCTTGCTTATGACAGAGCTGCTCTGTCCATGAAAGGAAGCCAGGCAAGAACCAACTTTGTTTACTCTGACAACATCAACTTCCACACTATCCTTTCTCCTGTGGATGTTCAAGTTCAAGTTCAAGTTCAACCTCTCTTGCCACCTTCACAGTTCCTCACTAACACCACTCACACCAAACAACCAAACAACCAAAATAGCCTCCCCAAGGTTATTCACACTTCAAACGGTGGAAACCCCTCCCCATTGAACAATATTGACGTGTGTGTTGAAACCACATATGGGTCGGCTCAGGATGATAGTTACTTCTTTTCCAGTGATTCTAACTCTGGCTATCTGGAATGCATAGTTCCTGATAACTGTTTCAGACCTGCTTCCTCCAGCACCAACAGTTCAAACTCCAGAAAGAGCAATGTGAGCGATCAAAAGGCTAACACAAACTCCATTGAGAGTACTAATCATCACCAGTACTCGCATGTTGACATGACCTCATTCTCTCAAGAAGGCATGGAAATGGCACCAAGGGCCTCTAACTTTTCAGATTTTTGGTATCCAAGTGAACTGAGCCAAGGATCATGGGATGATCAACAGTCATGGGATTGGAACAGCAGTGAACTTTCAGCTATATTTAAGAACCCATTAAGGGTGGAAAATGGGTGCATGGATGCATTTTATCCCATCACTGATCACAGTCCTAGTCCAAGTCCAAGCTATGGGCTAATGAATGAAGCTGCTTCTTCTACTACCTGTTCTCCATCACTTCCACCCTTTGGGGACGTAGACTTGGGATACCCACTCTTCTGA 1053 0.4587 MSTSRTSDTPFKGYDPNQTQMCLSLLQRNTSPCGERRGRRKQAEPGRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAQEAALAYDRAALSMKGSQARTNFVYSDNINFHTILSPVDVQVQVQVQPLLPPSQFLTNTTHTKQPNNQNSLPKVIHTSNGGNPSPLNNIDVCVETTYGSAQDDSYFFSSDSNSGYLECIVPDNCFRPASSSTNSSNSRKSNVSDQKANTNSIESTNHHQYSHVDMTSFSQEGMEMAPRASNFSDFWYPSELSQGSWDDQQSWDWNSSELSAIFKNPLRVENGCMDAFYPITDHSPSPSPSYGLMNEAASSTTCSPSLPPFGDVDLGYPLF* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g01523 350 PRINTS Ethylene responsive element binding protein signature 48 59 IPR001471 GO:0003700|GO:0006355
Phac3g01523 350 PRINTS Ethylene responsive element binding protein signature 70 86 IPR001471 GO:0003700|GO:0006355
Phac3g01523 350 ProSiteProfiles AP2/ERF domain profile. 47 104 IPR001471 GO:0003700|GO:0006355
Phac3g01523 350 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 35 243 - -
Phac3g01523 350 MobiDBLite consensus disorder prediction 209 236 - -
Phac3g01523 350 FunFam Ethylene-responsive transcription factor 2 47 105 - -
Phac3g01523 350 CDD AP2 47 103 IPR001471 GO:0003700|GO:0006355
Phac3g01523 350 SUPERFAMILY DNA-binding domain 48 105 IPR016177 GO:0003677
Phac3g01523 350 Gene3D AP2/ERF domain 47 105 IPR036955 GO:0003700|GO:0006355
Phac3g01523 350 SMART rav1_2 47 110 IPR001471 GO:0003700|GO:0006355
Phac3g01523 350 MobiDBLite consensus disorder prediction 138 167 - -
Phac3g01523 350 Pfam AP2 domain 50 96 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g01523 Phac-Chr3 17289967 17291545 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g01523 1 248 AP2-EREBP Transcription Factor Family AT5G18560 41.042 1.21e-58 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Phac3g01523 AP2 1.5e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g01523 - - gmx:100812047 574.318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac3g01523 3 17289967 17291545 Phac6g02323 6 22224157 22225307 PCT