Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g01519 ATGAAGAAGTTCTCAACCCTAAGAATCCTTCACCATCATCATTCTCTTCTCAATCTCAATGGCAGTCCACCCTTCTCCCTCTGTTTCAATTTCAAATTCGCCACCATCCCCCACGCCCATTCCTTTGTTGTCTCCTACCTCGTCTCAACCTGCGGCTTCTCCCCGGAATCCGCCCTCTCCGCCTCCCGCCACCTCCGCTTCCACAGTCCACAGAAGCCCGACTCCGTCCTGGCATTCTTCTCCGCGCATGGCTTCTCAGTCTCCCAAATCCGCTCCATCGTCAAAAGGGAAAGCCGCATCCTCCTCTGCAATCCCGACAAGGTCCTCCTCCCCAAGTTCCTCTTCCTCCGCTCCAAAGGCGCCTCCCCCGCCGACATAGTCCACATGGTCACCACCGGTCCTCGCGTCCTCCTTCGCAGCCTCAATAACCACATCGTCCCCACCTACCTCTTCATCAAAAGTTTCGTGGAATCCGACAAGCAAATCATCACCTGTCTCAAGCGCAACCTCTCCTTCATTGGCGACCGTCGCCTATCTTCCAACGTCCAAATTCTCTTGGATAACGGCGTCAAACGTTCCAGTATCGCCATGTTGCTCACCATGTGGCCCTCTATCCTCTGCACCTATAACCTGTCCCACACTGTTTGCGAATTGAAGGAAATGGGGTTTGAAACTTCCACCTCCACTTTCGCCGTGGCCATGCTCGCCAAAAGGACTGTGACTAAAGCCAAGTGGGACGACAAAGTTGAGGCTTTTAAGAAGTGGGGGTGGTCGGAGGAGCATGTGTTTGTGGCGTTTAAGAAGCACCCTTATTGCATGTTGACGGCCCGTGAGAAGATTGATGCCGTGTTCAGCTTTTGGGTTGAGGTGTTAGGGTATAGCTCTTTGGAGCTTCTCAAGTATCCTGTTATTTTTCAGATGAGTCTCCCTAAGAGGATTGTTCCCAGGTCTTTGGTTCTGAGGTTTCTTGCCAAGGAAGGTTTGCGGAAAAAGGGTGCCAGCAATTGCACGCCTATACTCGTGACGGAGAATGTGTTTCTGAACAAGTTTGTCAATTGTTTTGAGAAGCATTCTTCTCAGTTGTTGACGATGTATGAGAAAAGTCAGAATGAAGGGAACACTGGTAAGGGGGAGAAGAATGTTTGCTTGTAG 1152 0.5104 MKKFSTLRILHHHHSLLNLNGSPPFSLCFNFKFATIPHAHSFVVSYLVSTCGFSPESALSASRHLRFHSPQKPDSVLAFFSAHGFSVSQIRSIVKRESRILLCNPDKVLLPKFLFLRSKGASPADIVHMVTTGPRVLLRSLNNHIVPTYLFIKSFVESDKQIITCLKRNLSFIGDRRLSSNVQILLDNGVKRSSIAMLLTMWPSILCTYNLSHTVCELKEMGFETSTSTFAVAMLAKRTVTKAKWDDKVEAFKKWGWSEEHVFVAFKKHPYCMLTAREKIDAVFSFWVEVLGYSSLELLKYPVIFQMSLPKRIVPRSLVLRFLAKEGLRKKGASNCTPILVTENVFLNKFVNCFEKHSSQLLTMYEKSQNEGNTGKGEKNVCL* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g01519 383 PANTHER CGI-12 PROTEIN-RELATED 40 354 IPR003690 GO:0003690|GO:0006355
Phac3g01519 383 SMART mt_12 263 294 IPR003690 GO:0003690|GO:0006355
Phac3g01519 383 SMART mt_12 196 224 IPR003690 GO:0003690|GO:0006355
Phac3g01519 383 SMART mt_12 127 158 IPR003690 GO:0003690|GO:0006355
Phac3g01519 383 SMART mt_12 295 329 IPR003690 GO:0003690|GO:0006355
Phac3g01519 383 SMART mt_12 91 122 IPR003690 GO:0003690|GO:0006355
Phac3g01519 383 Pfam mTERF 77 228 IPR003690 GO:0003690|GO:0006355
Phac3g01519 383 Pfam mTERF 177 331 IPR003690 GO:0003690|GO:0006355
Phac3g01519 383 Gene3D Transcription termination factor 3, mitochondrial 140 360 IPR038538 -
Phac3g01519 383 FunFam Mitochondrial transcription termination factor-like 141 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g01519 Phac-Chr3 17253164 17255331 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Phac3g01519 mTERF 1.8e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g01519 K15032 - gmx:100788877 369.392