Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g01518 ATGGCTCCTTCTAGGAAATCTAGAAGTGTAAATAAGAGGTTTTCCAGTGTTCATGAGACTGCATCTAGTAAAGACAAAATTACAGAGAATGGTAGCAAAAATAGGCTGAAGGCGAGTCCTGGTATTCAGAAGAAGAGAAGATTGGCTGACATGTTAGGACCACAATGGAATAAGGAGGAGCTTGGGCATTTTTATGAAGCTTACCGTAAATATGGGAAAGATTGGAAGAAGGTTGCTCTTGCAGTACGTAATAGGTCTGCAGAAATGGTAGAGGCACTGTACACTATGAACAGGGCATATTTATCTCTCCCAGAGGGTACTGCTTCTGTTGTTGGACTGATAGCAATGATGACAGATCATTATAGTGTACTGGGAGGAAGTGACAGTGGTAAAGAAAGCAATGATGATGCAGAGATATCTAAAAAGTCTCAAAAGCGTCTGCGGGGAAAGCATCCAAGTGACAATAAAGCATTAGATGGGCACCTTTCAGATCATTCTCAGTCACATTCTGTTGCATCAGGTGATGGTTGCCTGTCATTGTTGAAGAAGAGACATTCTGGAATTAGGCCACATGCTGTTAGGAAAAGGACTCCCCGTGTCCCTATTTCTTATTCTATTGGTAAAGATATTGGGGAGAGGTTTTTTTCATCTGTAAGGCAGGGTTCCAAACAAATGGTTGATACTAATGATGTTACTCATAAGATTGCATTGGCATTGACTGAGGCTTCCCAGAGAGGTGGCTCTTCGAAAAATTCTGGATCACCAGAGAAGAAATTTTTATCTTCACCTGGTCTGAAAAGTGGGAAGAAGCATTCAAAATCAGAAAAAGCTGGAGCCAAGTTTTGCAGTTCTGAGTTGGATGATGGTAGTTCTGAGTTGAGTTTAGGAAGCACCGAAGGTAATAATGAAGATTACTCTAGAAAAACAATTCATCGGAGTGGTAGAGAAATTACTGGAAGAGGAAGGAATCAAGAAAAGAAAATAAAACAATATGGGAAGAATTTAGAGCCTGAGGGGAATTTAAACAAGCATTTGAATGACATAAAGGAAGCCTCCAGTGGGACAGATGATGGTAAAAATTTTATCAAATCCAGCTTCAACACTGATTTTGTAGATGCAAAAAATGCAAGGTCCTCTTACAAGGGTTCCAGGACGAAAAGTAAAAAGCTACTGTTGGAGAAAGATGAAGGTTCTGCTTTTGATGCTTTGAAAACTTTGGCTGATTTGTCTTTGATGCTGCCAGTAACAAACCCTGACACTGAGTCATCTGCACAGTTCAAGGAAGGGAACCATGATGTTGTTGGTGAATCTAAAATGGAAACACATAAAGTATTTCCTAAGATTGAAAGCACTGCTTCAAGTAAGTTTTCCAAGGTTTTTTCTGATAATGGAGCTGTTGTACCTGAAGCAGAGGGAACACTCCAGCTTAATGCAGGATTCAGGAAAAGGAAACAAAAATCTTTTAACTTGAAAAATGATGAAACTCATACTGGTTCTCATTTAAGTGGTTCCCAGAAAACCAAGCCCACTGATGAGGTGAAGAAATCCATGGTTAAAGGTAAGCGGTCATCTGTTGGTACAGCACATTCAAGACAACTAAAAGTGGTGAAATCCCCAGGAAATCTGTCTTCAAGCACTAATGACAAAAGGGAAAGGGATGATGATTCATCTTTTTCTCCCATTAAGGTTTCATCAACTAATCAAGTCAGTCCGTTAGACAGAGGAAGGCCAAGAAGAAAAATGGAAAAACCAAAACCAATGACACAAGATTTGGTGGTCTCCACAAATACTTTTAACAGTCAACATAATAAATCAATTGCCTCACTCCCAGATGGCTCTATTAGTCAAAAGGGAAAGCTTATTAATTGTCTGTCTTCATATCAAATGCGGCGATGGTGCACTTTTGAGTGGTTTTATAGTGCTATCGATTACCCATGGTTTTCGAAGAGAGAGTTTGTGGAGTACTTAGACCATGTTGGATTGGGTCATGTTCCTAGATTGACTCGTATTGAGTGGGGCGTCATTAGAAGTTCTCTTGGCAGACCAAGAAGATTTTCGGAGCAATTTTTGACAGAGGAGAAGCATAAACTTCATGAATACAGGGAATCTGTTAGATCACACTATGCTGAAATTCTTGCTGGTACCAAGGAAGGACTTCCTACTGATTTGGCCCAACCTTTAATTGTTGGGCAGCGTGTTATTGCTATTCATCCAAAGACAAGAGAAATTCATGGTGGAAGCGTACTAACGGTTGATCATTGTAGGTATAGGGTTCAGTTTGACCAGCTTGAACTTGGGGTTGAATTTGTCATGGATATTGACTGCATGCCTTTGTATCCATTTGAAAATATGCCTACATCTCTGATACAACACAATATCTCTTCTGCTCAAATAAACGAAAACTTTGTTGAGCTCAAGCCTAATGGAAAACTGAAACAGAGAAAGGTTGCTGGGCACACAATATTGTCCCCTAGTGAGAACTCAGATACCATAAAAAGTCTTCATATATCCGCCACCGTGCACGGAACCGGTACTTTATCAAAACAGGTTTTTTCTTCAAGCTCCAAAACACAACCGAAAGTTGTGTGCAGCGAGATTGGTAATGCCCAACTAGCATCAAGTTCTCAACCTTCTCTTCTTGAACATGTACATTCGAAAGAAGCTGACACATTAGCTATTTCAGAGTTGAATCGTGCTCTAGACAAAAAGGAACTTGTATTATCTGAACTGAAGCACATGAATGATGGGATATCAGAGAGCCAGAAATATGGAGACAGCTCAGTAAAGGATTCGGAACTTTTTAAGAGGGATTATGCTTCAGTACTAAAGCAATTAACTGAAGCAAATGAACAGGTTTCCTCTGCCTTGTTTTGCTTGAGGCAACGCAACACATATCAAGCAAGCTCCTCTGCTTTTCAATTAAAGCCCATGGCTAATTTTGATGATCCTAGTGGTCAGGCGAGCTCTTCCAATTGTTCAGCTTGCCACAACCAAGAATCAATATCTCAAAGTCATATAGCTGAAATTGTTGAAAGTTCTAGAAGAAAAGCACGGACAATGGTTGTTCAAGCTTCTCAGGCAATGTCAAATTTAAGAACGACAGAAAGTAAGGTTGAAAGAATTGAGGATGCAATAAATTTCATCAATAACCAGCTTTCAGTGGACGAACCTACTGCTTCATCAACAACTTTTGTGCCTGCAGATTCTCTTTCTCATGCTTCTCAGGATCAATTGACTGCCAGCGTATTAAATCCCTTAGCAAGTTGTCATGTACAAGATACTGAACTCAACAGTTCATCTGACCAAAATGAAATGAAAATTCCCTCAGAACTCATATCTCATTGCCTTGCTACGTTGTTCATGATTCAGAAGTGTACAGAACGACAATTTCCCCCAGCTGATGTCGCTCAGGTATTAGATTCTGCTGTCACCAGTTTGCAGCCATTATGTTCAAAGAATCTTCCAATATATGGTGAGATACAGAAATGCATGGGTATCATAAGAAATCAGATATTGGCACTCATACCTACATAG 3534 0.3987 MAPSRKSRSVNKRFSSVHETASSKDKITENGSKNRLKASPGIQKKRRLADMLGPQWNKEELGHFYEAYRKYGKDWKKVALAVRNRSAEMVEALYTMNRAYLSLPEGTASVVGLIAMMTDHYSVLGGSDSGKESNDDAEISKKSQKRLRGKHPSDNKALDGHLSDHSQSHSVASGDGCLSLLKKRHSGIRPHAVRKRTPRVPISYSIGKDIGERFFSSVRQGSKQMVDTNDVTHKIALALTEASQRGGSSKNSGSPEKKFLSSPGLKSGKKHSKSEKAGAKFCSSELDDGSSELSLGSTEGNNEDYSRKTIHRSGREITGRGRNQEKKIKQYGKNLEPEGNLNKHLNDIKEASSGTDDGKNFIKSSFNTDFVDAKNARSSYKGSRTKSKKLLLEKDEGSAFDALKTLADLSLMLPVTNPDTESSAQFKEGNHDVVGESKMETHKVFPKIESTASSKFSKVFSDNGAVVPEAEGTLQLNAGFRKRKQKSFNLKNDETHTGSHLSGSQKTKPTDEVKKSMVKGKRSSVGTAHSRQLKVVKSPGNLSSSTNDKRERDDDSSFSPIKVSSTNQVSPLDRGRPRRKMEKPKPMTQDLVVSTNTFNSQHNKSIASLPDGSISQKGKLINCLSSYQMRRWCTFEWFYSAIDYPWFSKREFVEYLDHVGLGHVPRLTRIEWGVIRSSLGRPRRFSEQFLTEEKHKLHEYRESVRSHYAEILAGTKEGLPTDLAQPLIVGQRVIAIHPKTREIHGGSVLTVDHCRYRVQFDQLELGVEFVMDIDCMPLYPFENMPTSLIQHNISSAQINENFVELKPNGKLKQRKVAGHTILSPSENSDTIKSLHISATVHGTGTLSKQVFSSSSKTQPKVVCSEIGNAQLASSSQPSLLEHVHSKEADTLAISELNRALDKKELVLSELKHMNDGISESQKYGDSSVKDSELFKRDYASVLKQLTEANEQVSSALFCLRQRNTYQASSSAFQLKPMANFDDPSGQASSSNCSACHNQESISQSHIAEIVESSRRKARTMVVQASQAMSNLRTTESKVERIEDAINFINNQLSVDEPTASSTTFVPADSLSHASQDQLTASVLNPLASCHVQDTELNSSSDQNEMKIPSELISHCLATLFMIQKCTERQFPPADVAQVLDSAVTSLQPLCSKNLPIYGEIQKCMGIIRNQILALIPT* 1178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g01518 1177 MobiDBLite consensus disorder prediction 242 258 - -
Phac3g01518 1177 Gene3D - 3 108 - -
Phac3g01518 1177 SMART DIRP_2 638 739 IPR033471 -
Phac3g01518 1177 MobiDBLite consensus disorder prediction 1 17 - -
Phac3g01518 1177 MobiDBLite consensus disorder prediction 18 32 - -
Phac3g01518 1177 MobiDBLite consensus disorder prediction 1 41 - -
Phac3g01518 1177 MobiDBLite consensus disorder prediction 523 545 - -
Phac3g01518 1177 SUPERFAMILY Homeodomain-like 52 99 IPR009057 -
Phac3g01518 1177 CDD SANT 56 90 IPR001005 -
Phac3g01518 1177 MobiDBLite consensus disorder prediction 488 589 - -
Phac3g01518 1177 MobiDBLite consensus disorder prediction 268 282 - -
Phac3g01518 1177 PANTHER LIN-9 1 1177 IPR010561 GO:0006351|GO:0017053
Phac3g01518 1177 MobiDBLite consensus disorder prediction 287 303 - -
Phac3g01518 1177 MobiDBLite consensus disorder prediction 242 314 - -
Phac3g01518 1177 Coils Coil 1024 1051 - -
Phac3g01518 1177 Coils Coil 893 913 - -
Phac3g01518 1177 Pfam DIRP 637 738 IPR033471 -
Phac3g01518 1177 MobiDBLite consensus disorder prediction 126 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g01518 Phac-Chr3 17225675 17250717 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Phac3g01518 DIRP 1.7e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g01518 - - gmx:100781646 2029.6