Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g01509 ATGTTGTCTTGGTCAATAAAGAGAGCAGTTCAACTGTTGGAGTTGAATTCATTCCTTCCAAAGATGGTGGACAATGTTGGAGGCAGTTCCTCTAATCCTGAAAACAGTGGCATCAGGGAACAAGACTGTTTGTTGCCAATAGCCAATGTTGGGAGGATCATGAAGCAGATTCTGCCTCCTAACGCAAAAATCTCAAAGGAATCAAAGGAAACAATGCAAGAGTGTGTATCAGAGTTTATAAGCTTTGTGACGAGTGAGGCATCAGAGAAGTGCAGGAAGGAGAGGAGGAAGACTGTGAACGGAGATGATATATGCTGGGCCTTAGGGTCGCTTGGTTTTGATGACTATGCAGAGCCATTGAGAAGGTATTTGCACAGATATAGAGAAGTAGAAGTAGATAGATCAGCCATCCAAGAGAGAGGAAATAGCCCCTCAAAAGAGAAGAATAATGAATTCTGA 459 0.427 MLSWSIKRAVQLLELNSFLPKMVDNVGGSSSNPENSGIREQDCLLPIANVGRIMKQILPPNAKISKESKETMQECVSEFISFVTSEASEKCRKERRKTVNGDDICWALGSLGFDDYAEPLRRYLHRYREVEVDRSAIQERGNSPSKEKNNEF* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g01509 152 FunFam Nuclear transcription factor Y subunit B-3 33 152 - -
Phac3g01509 152 Gene3D Histone, subunit A 32 151 IPR009072 GO:0046982
Phac3g01509 152 SUPERFAMILY Histone-fold 41 150 IPR009072 GO:0046982
Phac3g01509 152 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 45 108 IPR003958 -
Phac3g01509 152 PRINTS CCAAT-binding transcription factor subunit A signature 72 90 - -
Phac3g01509 152 PRINTS CCAAT-binding transcription factor subunit A signature 91 109 - -
Phac3g01509 152 PRINTS CCAAT-binding transcription factor subunit A signature 110 128 - -
Phac3g01509 152 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 31 139 IPR027113 GO:0001228|GO:0006355|GO:0016602
Phac3g01509 152 ProSitePatterns NF-YB/HAP3 subunit signature. 75 91 IPR003956 GO:0005634|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g01509 Phac-Chr3 17103242 17103700 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g01509 38 149 CCAAT-HAP3 Transcription Factor Family AT2G47810 68.750 8.01e-55 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Phac3g01509 CBFD_NFYB_HMF 7.7e-27 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g01509 K08065 - gmx:100786046 224.557