Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g01508 ATGTTCATTGTTTACACCCGCACAACTCTTGGTTGTGCCAAGGTTTTCGCTTTCACAACCCTAAAATGGAGCCCTCTTCTCCAACTCCAATTTCCCAAATTCCAATTCTGCACTGCCACCTCCACCTCCCACTCACGCTCCTTCGTGGTTTCATACCTCATTAACAACTGTGCCTTCTCCCAAGAAACCGCTCTCAAAGCTTCCCGCAAGCTTCATTTTTCGAAACCCCAAAAGCCTGATTCTGTTCTCTCCTTCTTCCGAAACCACGCCTTCTCCAACTCTCATATATCTCATATCCTCCAAAGAGAGCCCTGGCTACTTTCATGCAACACCCAAAAGACGCTGTTGCCAAAGTTTGAATTTTTGCTTTCAAAAGGTGCTTCATCCCTTGACGTTGTTCACGTCGTGACTGCCTGCCCTAATTTTCTCCGACGAAGCTTGGAGAGTCATATAATCCCAACATATGAATTTCTAAGAGGTTTCCTCCAAACCTTGTTTACAGAGAAGCAAATCATTGATTTCCTGATTCAGAATCCTTTTTTACTTTATGACGGGCGTGTGGCACCTAACGTCAAATTGTTGCTTGATAGTGGAGTTACCCGCTCAGAAACGGTTAAATTGCTCCAGAGATGGCCTCGTGTACTCTACTCTGGCAACGTATCAAAGGCAGTTCAGGAATTGAAGCAAATGGGCTTCGATGCTTCACTTTCAACTTTCTGCGTAGCATTGCTTGCCAAAAGGACCGTAAACGAAAGCAAATGGGACGAGAAGATTGACACTTATAAGAGGTGGGGGTGGTCCCAAGAACAAGTTCTTCTAGCATTTAGGAGGCATCCTTTTTGTATGTTGGCATCCCGTGATAAAATTAATGCAGTGATGAGTTATTGGGTGGAGCAGGCAGGTTTCAATTCTGTGGACCTTCTCAAAACTCCTGGAATTATTTCAATGAGTCTCCGGAAAAGGATTGTTCCGAGGGCTTGTGTCTTGCAGTTCCTTATCTCGAAAGGTCTGGTACGGAACGGTGCAAGCTTAACGGTACCATTTATTCTGACTGAGAAGTTGTTCCTGGACAAATATGTGAAACGTTTTAAGGAGGATTCTTCTCATCTTTTAAAGCTGTACACAGAAAATATGAGTCTTGGAAATGATAAGGACAACACTTGTATGTGA 1170 0.4385 MFIVYTRTTLGCAKVFAFTTLKWSPLLQLQFPKFQFCTATSTSHSRSFVVSYLINNCAFSQETALKASRKLHFSKPQKPDSVLSFFRNHAFSNSHISHILQREPWLLSCNTQKTLLPKFEFLLSKGASSLDVVHVVTACPNFLRRSLESHIIPTYEFLRGFLQTLFTEKQIIDFLIQNPFLLYDGRVAPNVKLLLDSGVTRSETVKLLQRWPRVLYSGNVSKAVQELKQMGFDASLSTFCVALLAKRTVNESKWDEKIDTYKRWGWSQEQVLLAFRRHPFCMLASRDKINAVMSYWVEQAGFNSVDLLKTPGIISMSLRKRIVPRACVLQFLISKGLVRNGASLTVPFILTEKLFLDKYVKRFKEDSSHLLKLYTENMSLGNDKDNTCM* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g01508 389 FunFam Mitochondrial transcription termination factor-like 147 367 - -
Phac3g01508 389 PANTHER CGI-12 PROTEIN-RELATED 46 364 IPR003690 GO:0003690|GO:0006355
Phac3g01508 389 Pfam mTERF 168 345 IPR003690 GO:0003690|GO:0006355
Phac3g01508 389 Pfam mTERF 83 234 IPR003690 GO:0003690|GO:0006355
Phac3g01508 389 Gene3D Transcription termination factor 3, mitochondrial 163 372 IPR038538 -
Phac3g01508 389 Gene3D Transcription termination factor 3, mitochondrial 56 162 IPR038538 -
Phac3g01508 389 SMART mt_12 97 128 IPR003690 GO:0003690|GO:0006355
Phac3g01508 389 SMART mt_12 133 164 IPR003690 GO:0003690|GO:0006355
Phac3g01508 389 SMART mt_12 304 338 IPR003690 GO:0003690|GO:0006355
Phac3g01508 389 SMART mt_12 272 303 IPR003690 GO:0003690|GO:0006355
Phac3g01508 389 SMART mt_12 172 200 IPR003690 GO:0003690|GO:0006355
Phac3g01508 389 SMART mt_12 205 233 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g01508 Phac-Chr3 17082120 17084831 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Phac3g01508 mTERF 5.6e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g01508 K15032 - gmx:102667698 510.375