Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g01486 ATGCAGAACGAGGAAGGAAAACTCACTGAGTTATACGTTCCTAGGAAATGCTCTGCCACTAACAGACTCATAACTGCAAAGGACCATGCTTCAGTTCAGATGAACATTGGCCATTTGGATGAGAATGGTATCCACAATGGTCATTTTTCCACGTTTGCTCTCTGTGGCTTCGTTCGAGCTCAGGGTGATGCTGACAGTGCACTAGATAGGTTGTGGCTGAAGAAGAAAGCAGAAATTAAACAACACTAG 249 0.4418 MQNEEGKLTELYVPRKCSATNRLITAKDHASVQMNIGHLDENGIHNGHFSTFALCGFVRAQGDADSALDRLWLKKKAEIKQH* 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g01486 82 PANTHER 40S RIBOSOMAL PROTEIN S21 1 81 IPR001931 GO:0003735|GO:0005840|GO:0006412
Phac3g01486 82 Gene3D - 1 81 IPR038579 -
Phac3g01486 82 FunFam 40S ribosomal protein S21 1 81 - -
Phac3g01486 82 ProSitePatterns Ribosomal protein S21e signature. 11 19 IPR018279 GO:0003735|GO:0005840|GO:0006412
Phac3g01486 82 Pfam Ribosomal protein S21e 1 76 IPR001931 GO:0003735|GO:0005840|GO:0006412
Phac3g01486 82 PIRSF RPS21e 1 82 IPR001931 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g01486 Phac-Chr3 16814555 16816145 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g01486 1 82 Cytoplasmic Ribosomal Protein Gene Family AT5G27700 79.268 6.19e-49 147