Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g01485 ATGCAGAACGAGGAAGGAAAACTCACTGAGTTATACGTTCCTAGGAAATGCTCTGCCACTAACAGACTCATAACTGCAAAGGACCATGCTTCAGTTCAGATGAACATTGGCCATTTGGATGAGAATGGTATCCACAATGGTCATTTTTCCACGTTTGCTCTCTGTGGCTTCGTTCGAGCTCAGGTCCGTATGCTTTTATTTTGTCTTTCTCTAAAGCATTATTGTATTGCATTATGGCTTATCATCCCAGGATTTATCTGA 261 0.4138 MQNEEGKLTELYVPRKCSATNRLITAKDHASVQMNIGHLDENGIHNGHFSTFALCGFVRAQVRMLLFCLSLKHYCIALWLIIPGFI* 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g01485 86 PANTHER 40S RIBOSOMAL PROTEIN S21 1 63 IPR001931 GO:0003735|GO:0005840|GO:0006412
Phac3g01485 86 ProSitePatterns Ribosomal protein S21e signature. 11 19 IPR018279 GO:0003735|GO:0005840|GO:0006412
Phac3g01485 86 Gene3D - 1 73 IPR038579 -
Phac3g01485 86 Pfam Ribosomal protein S21e 1 61 IPR001931 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g01485 Phac-Chr3 16814555 16816145 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g01485 1 61 Cytoplasmic Ribosomal Protein Gene Family AT5G27700 81.967 4.95e-36 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g01485 K02971 - gmx:100499937 121.324