Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g01475 ATGAACATGGTATCAGTGTCAGCGGTGTGCAAGGCGGTGGGAAGTTTCAACCCGGGAGTGACGATGGAGACGCTGTCGTTTTTCAGGCAGCGCAACAAGGAAAAGGTTGTGGTGATAGTTGGAGCAACGGGGACAGGAAAGTCAAAGCTTAGCATAGACCTTGCCACGCACTTCCCACCAGCGGAGATAGTCAACTCCGACAAAATGCAAGTGTACGAAGGTCTGGACATCACCACCAACAAAGTCACAGAAGAGGAGTGCCGAGGGGTCCCACACCATCTCCTAGGCACGGTCCAACCCAACATGGATTTCAGTGTCAACGACTTTTGCCACCACGCCACCCTCGCCGTTGGCTCCATTTTGAAACGCGACGGGTTGCCCATCATTGCGGGTGGGTCCAACTCTTTCCTCGACGCCTTGGTCAACCACTACCCTGACTTTCGGTTGCGCTATCAGTGTTTGTTCCTCTGGGTCGACGTCTCCCTCCCGGTGCTCCATTCCTCTCTCTCTGCACGTGTGGATCGCATGATCCGCGCCGGCCAGGTCGACGAGGTTCGACAATTTTTCCAATACCACAACGACGACTACACTGTGGGCATTCGAAAGGCCATTGGCGTCCCCGAGTTTCATTCCTTTTTCCAAGCCGAAGCTGACGGAGCCGACGAGAGGACCAAGGAGAAGCTCCTCCAGGCTGCCATTGCCTCCATCAAAATAAACAACTGCAACCTCGCCACCCGACAGCTCCACAAAATTCACCGCCTCCACGCCATTTTCAAACGGAACATGCACCGCCTCGACGCCACCGAGGTTTTCCTCAGGAGCACTCCCCAAGAAGCAGAACAAGCGTGGGAGGATCACGTTCTATCCAAAAGCCGAAGGATTCTTCACAACTTCCTCTACGACGACACACATGTTGATGTTGCTCTTGCTTCTGTTATTGCTTCTTCGTCGCCGCCCATGGCCGCCGCCGCCGCAACTCGCTAG 984 0.5488 MNMVSVSAVCKAVGSFNPGVTMETLSFFRQRNKEKVVVIVGATGTGKSKLSIDLATHFPPAEIVNSDKMQVYEGLDITTNKVTEEECRGVPHHLLGTVQPNMDFSVNDFCHHATLAVGSILKRDGLPIIAGGSNSFLDALVNHYPDFRLRYQCLFLWVDVSLPVLHSSLSARVDRMIRAGQVDEVRQFFQYHNDDYTVGIRKAIGVPEFHSFFQAEADGADERTKEKLLQAAIASIKINNCNLATRQLHKIHRLHAIFKRNMHRLDATEVFLRSTPQEAEQAWEDHVLSKSRRILHNFLYDDTHVDVALASVIASSSPPMAAAAATR* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g01475 327 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 33 298 IPR039657 -
Phac3g01475 327 Gene3D - 33 299 IPR027417 -
Phac3g01475 327 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 162 262 - -
Phac3g01475 327 Pfam IPP transferase 70 145 - -
Phac3g01475 327 Pfam IPP transferase 150 249 - -
Phac3g01475 327 FunFam Adenylate isopentenyltransferase 5, chloroplastic 162 262 - -
Phac3g01475 327 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 33 191 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g01475 Phac-Chr3 16580197 16582148 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g01475 150 303 C2H2 Transcription Factor Family AT2G27760 29.444 9.07e-14 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g01475 K10760 - gmx:100778430 482.641