Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g01345 ATGAAGGTTATTGTCCCAAATAAAGAACAGCCAAAAACTTTGCAAACTAAGGATAAACTGAAGTTGTCCAGATGCTCTGAAGTTTACGGAACTTCGAAGAGAAAAACTGAAAAAATCCCTGAGCATGGTCATAAGAAGAATTGTGCAGTAAGGGTGACTGAAAAGAAGCAAGAGGTTCGAGAAATTAATAAGTTTGATAATATAAAACCTAAGTTAGAAGCGAGAGAAGATTTGTGTTCACTGAAGACAACAAAACTACCATACTGGAGAAGAGATGAGAAACAAAAGCTTACTGTCTCAAACAAGAAAAGGAAATATAAAGATGATCTCTTGAATGATGATTTAGAAGATGAAGAAATGCTTATTCTGTTAAGGGCGAAGACCAGGAGCAGATCTAGAAGAATGAATATTGTGAAGAATGTTGAACAAAAGCCCCGAAATTGTCATCAATGCATGAAAAAGGGCAGAACACTTTTTGTGCCTTGTACTAAATGCCCGAACATGTACTGTATGCAGTGTGTTGATAAATGGTACCCTGATATGAAAATAGAAGAAATTGCTGTAAGTTGTCCGTTTTGCCGGAAAAACTGCAATTGCAATGTTTGCTTGTGCTCAAGAGGAATGATTAAGACATCTAACAGGGACATAACTGATTATGAAAAGGCTCAGAATCTGCATTATATGATTAACTTACTCCTACCATTTTTGAAACAAATTTGTCATGAACAAAATCAAGAGGAGCAGATTGAAGCTAAAATACTAGGAAAGCATTCTTTTGAGAAGGAAATACCTCAAAGTCTTTGTGGCAACGATGAACGTGTCTATTGTGATCACTGTGCTACTTCAATTATTGACCTTCATAGAAGCTGCCCCAGTTGTTCCTATGAACTCTGCCTTAGTTGTTGCCAAGAAATACGTGATGGAAGCATTACACCCCGGGTCGAGCAGAAGTTCTCATATGTGAATAGGGGCTATGATTATATGCATGGTGGAGACCCTCTACCTGTGTCTAATGATTTCGGAACATCAGAATGTCATACCAAGCTATCTAATGTGTGGAATGCTAAGAGTGATGGAAGCATCCCATGTGCACCAAAGGAGTTCGGCGGTTGTGGTAGTGCTGCATTGGAGCTGAGACGTGTCCTACCAAGTGGGTGGATATCTGAATTGGAAATCAGAACTCGCAGTATGCTGAAAATTTGGGAAAATGTAAACACTACTCTTCAGCAAAAAAAAGCAGTATCAAGCTACACCTCTTTGAGAAATGAAGCTATTAAAGTAGACATAAATGATGATAATAAGTACTGTTCAGAGTCAAGTAACATTCAAAAGGGAGGATTGTTACTTTTCCAAAAGCATTGGGCTAATGGCGAACCAATTATAGTTCGTGATGCCCTTAAACTGGGCACCGGTCTGAGCTGGAAGCCGATGGTAATGTGGCGAGCATTATGCGAAAATAGGGTTTCAGAGGTTGGTTCAAAAATGTCAGAAGTGAAAGCCATTGATTGCCTGGCTAATTGTGAGGTAGAAATCGATACTCACACATTTTTTAAAGGTTATATAGAGGGAAGAACATACAGAAATCTCTGGCCAGAGATGCTCAAGCTAAAAGACTGGCCCCCCTCTGATAAATTTGAAGATCTTTTGCCCCGCCATTGTGATGAGTTTATTCGCTCCTTGCCATTCCAAGAGTACAGCGATCCTCGGAGCGGAATTCTCAATCTTGCTGCGAAGTTGCCAGCACATGTCCTAAAACCTGACATGGGTCCGAAAACATATATTGCCTATGGGATTAAAGAAGAGCTTGGTAGAGGAGACTCTGTAACAAAGCTTCACTGTGATATGTCTGATGCGGTCAATATTTTGACCCATACAGCAGAGGTGATATTAACTGATGAGCAGCACTTAATTATTTCAAAGTTGAAAGAAGCACACAAGGTACAAGATGAGAGAGAGCAGTGTGCCCAAGAAAGGGTTTCCGACAGCCTGAATGGCCGACCTTTCAAACACAACAAAGTACGGACAGAAAATAAGGTAGTTTTAGAATCCAAAGAGATAGAGAAGCGCCCTATTGAAATTAATGGAAGGATCTTTCCAAGTTATGTACATGAAGGGGTCACGTCTGCTACAGAGAATGAATCAATGGAAACAGGCAGTGCTCTATGGGATATCTTTCGGAGAGAAGATTCTGAGAAGTTAGAAACATATCTTAGGAAGCACTCAAGAGAATTTAGACATACTTATTGTTCTCCCGTTGAACAGGTTGCACATCCAATTCATGACCAATGTTTTTATTTGACATCGGAGCACAAGAAGAAGCTGAAGGAGGAGTTCGATGTAGAACCGTGGACTTTTGAGCAAAAACTTGGGGAGGCAGTATTTATTCCTGCTGGATGCCCACATCAAGTCAGGAATCTCAAGTCATGCACAAAAGTTGCGGTAGACTTTGTGTCTCCAGAAAATATCCATGAGTGTCTGCGTTTAACTAATGAGTTCCGCCAGCTTCCCAAGAACCACAAGGCTAGAGAAGATAAGCTTGAGATAAAGAAGATGATAGTTTATGCCATTGATGAAGCTGTCACAGACCTAAAAGCTTTGCTGAACTTTTCTTGA 2613 0.4018 MKVIVPNKEQPKTLQTKDKLKLSRCSEVYGTSKRKTEKIPEHGHKKNCAVRVTEKKQEVREINKFDNIKPKLEAREDLCSLKTTKLPYWRRDEKQKLTVSNKKRKYKDDLLNDDLEDEEMLILLRAKTRSRSRRMNIVKNVEQKPRNCHQCMKKGRTLFVPCTKCPNMYCMQCVDKWYPDMKIEEIAVSCPFCRKNCNCNVCLCSRGMIKTSNRDITDYEKAQNLHYMINLLLPFLKQICHEQNQEEQIEAKILGKHSFEKEIPQSLCGNDERVYCDHCATSIIDLHRSCPSCSYELCLSCCQEIRDGSITPRVEQKFSYVNRGYDYMHGGDPLPVSNDFGTSECHTKLSNVWNAKSDGSIPCAPKEFGGCGSAALELRRVLPSGWISELEIRTRSMLKIWENVNTTLQQKKAVSSYTSLRNEAIKVDINDDNKYCSESSNIQKGGLLLFQKHWANGEPIIVRDALKLGTGLSWKPMVMWRALCENRVSEVGSKMSEVKAIDCLANCEVEIDTHTFFKGYIEGRTYRNLWPEMLKLKDWPPSDKFEDLLPRHCDEFIRSLPFQEYSDPRSGILNLAAKLPAHVLKPDMGPKTYIAYGIKEELGRGDSVTKLHCDMSDAVNILTHTAEVILTDEQHLIISKLKEAHKVQDEREQCAQERVSDSLNGRPFKHNKVRTENKVVLESKEIEKRPIEINGRIFPSYVHEGVTSATENESMETGSALWDIFRREDSEKLETYLRKHSREFRHTYCSPVEQVAHPIHDQCFYLTSEHKKKLKEEFDVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENIHECLRLTNEFRQLPKNHKAREDKLEIKKMIVYAIDEAVTDLKALLNFS* 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g01345 870 Pfam JmjC domain, hydroxylase 710 816 IPR003347 -
Phac3g01345 870 ProSiteProfiles JmjC domain profile. 568 833 IPR003347 -
Phac3g01345 870 ProSiteProfiles Zinc finger RING-type profile. 148 194 IPR001841 -
Phac3g01345 870 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 32 866 IPR045109 GO:0032454|GO:0033169
Phac3g01345 870 CDD cupin_RmlC-like 757 817 - -
Phac3g01345 870 Gene3D Cupin 429 842 - -
Phac3g01345 870 SMART cupin_9 549 833 IPR003347 -
Phac3g01345 870 SUPERFAMILY Clavaminate synthase-like 449 864 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g01345 Phac-Chr3 14744936 14750433 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Phac3g01345 JmjC 8.4e-16 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g01345 K15601 K21989 gmx:100797860 1335.86