Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g01344 ATGCTATCTATCGATTTTTCACCTAAAGAGATTTGTGGTCAGGGAAGAATGAAGGTTATTGTCCCAAATAAAGAACAGCCAAAAACTTTGCAAACTAAGGATAAACTGAAGTTGTCCAGATGCTCTGAAGTTTACGGAACTTCGAAGAGAAAAACTGAAAAAATCCCTGAGCATGGTCATAAGAAGAATTGTGCAGTAAGGGTGACTGAAAAGAAGCAAGAGGTTCGAGAAATTAATAAGTTTGATAATATAAAACCTAAGTTAGAAGCGAGAGAAGATTTGTGTTCACTGAAGACAACAAAACTACCATACTGGAGAAGAGATGAGAAACAAAAGCTTACTGTCTCAAACAAGAAAAGGAAATATAAAGATGATCTCTTGAATGATGATTTAGAAGATGAAGAAATGCTTATTCTGTTAAGGGCGAAGACCAGGAGCAGATCTAGAAGAATGAATATTGTGAAGAATGTTGAACAAAAGCCCCGAAATTGTCATCAATGCATGAAAAAGGGCAGAACACTTTTTGTGCCTTGTACTAAATGCCCGAACATGTACTGTATGCAGTGTGTTGATAAATGGTACCCTGATATGAAAATAGAAGAAATTGCTGTAAGTTGTCCGTTTTGCCGGAAAAACTGCAATTGCAATGTTTGCTTGTGCTCAAGAGGAATGATTAAGACATCTAACAGGGACATAACTGATTATGAAAAGGCTCAGAATCTGCATTATATGATTAACTTACTCCTACCATTTTTGAAACAAATTTGTCATGAACAAAATCAAGAGGAGCAGATTGAAGCTAAAATACTAGGAAAGCATTCTTTTGAGAAGGAAATACCTCAAAGTCTTTGTGGCAACGATGAACGTGTCTATTGTGATCACTGTGCTACTTCAATTATTGACCTTCATAGAAGCTGCCCCAGTTGTTCCTATGAACTCTGCCTTAGTTGTTGCCAAGAAATACGTGATGGAAGCATTACACCCCGGGTCGAGCAGAAGTTCTCATATGTGAATAGGGGCTATGATTATATGCATGGTGGAGACCCTCTACCTGTGTCTAATGATTTCGGAACATCAGAATGTCATACCAAGCTATCTAATGTGTGGAATGCTAAGAGTGATGGAAGCATCCCATGTGCACCAAAGGAGTTCGGCGGTTGTGGTAGTGCTGCATTGGAGCTGAGACGTGTCCTACCAAGTGGGTGGATATCTGAATTGGAAATCAGAACTCGCAGTATGCTGAAAATTTGGGAAAATGTAAACACTACTCTTCAGCAAAAAAAAGCAGTATCAAGCTACACCTCTTTGAGAAATGAAGCTATTAAAGTAGACATAAATGATGATAATAAGTACTGTTCAGAGTCAAGTAACATTCAAAAGGGAGGATTGTTACTTTTCCAAAAGCATTGGGCTAATGGCGAACCAATTATAGTTCGTGATGCCCTTAAACTGGGCACCGGTCTGAGCTGGAAGCCGATGGTAATGTGGCGAGCATTATGCGAAAATAGGGTTTCAGAGGTTGGTTCAAAAATGTCAGAAGTGAAAGCCATTGATTGCCTGGCTAATTGTGAGGTAGAAATCGATACTCACACATTTTTTAAAGGTTATATAGAGGGAAGAACATACAGAAATCTCTGGCCAGAGATGCTCAAGCTAAAAGACTGGCCCCCCTCTGATAAATTTGAAGATCTTTTGCCCCGCCATTGTGATGAGTTTATTCGCTCCTTGCCATTCCAAGAGTACAGCGATCCTCGGAGCGGAATTCTCAATCTTGCTGCGAAGTTGCCAGCACATGTCCTAAAACCTGACATGGGTCCGAAAACATATATTGCCTATGGGATTAAAGAAGAGCTTGGTAGAGGAGACTCTGTAACAAAGCTTCACTGTGATATGTCTGATGCGGTCAATATTTTGACCCATACAGCAGAGGTGATATTAACTGATGAGCAGCACTTAATTATTTCAAAGTTGAAAGAAGCACACAAGGTACAAGATGAGAGAGAGCAGTGTGCCCAAGAAAGGGTTTCCGACAGCCTGAATGGCCGACCTTTCAAACACAACAAAGTACGGACAGAAAATAAGGTAGTTTTAGAATCCAAAGAGATAGAGAAGCGCCCTATTGAAATTAATGGAAGGATCTTTCCAAGTTATGTACATGAAGGGGTCACGTCTGCTACAGAGAATGAATCAATGGAAACAGGCAGTGCTCTATGGGATATCTTTCGGAGAGAAGATTCTGAGAAGTTAGAAACATATCTTAGGAAGCACTCAAGAGAATTTAGACATACTTATTGTTCTCCCGTTGAACAGGTTGCACATCCAATTCATGACCAATGTTTTTATTTGACATCGGAGCACAAGAAGAAGCTGAAGGAGGAGTTCGATGTAGAACCGTGGACTTTTGAGCAAAAACTTGGGGAGGCAGTATTTATTCCTGCTGGATGCCCACATCAAGTCAGGAATCTCAAGTCATGCACAAAAGTTGCGGTAGACTTTGTGTCTCCAGAAAATATCCATGAGTGTCTGCGTTTAACTAATGAGTTCCGCCAGCTTCCCAAGAACCACAAGGCTAGAGAAGATAAGCTTGAGATAAAGAAGATGATAGTTTATGCCATTGATGAAGCTGTCACAGACCTAAAAGCTTTGCTGAACTTTTCTTGA 2661 0.4014 MLSIDFSPKEICGQGRMKVIVPNKEQPKTLQTKDKLKLSRCSEVYGTSKRKTEKIPEHGHKKNCAVRVTEKKQEVREINKFDNIKPKLEAREDLCSLKTTKLPYWRRDEKQKLTVSNKKRKYKDDLLNDDLEDEEMLILLRAKTRSRSRRMNIVKNVEQKPRNCHQCMKKGRTLFVPCTKCPNMYCMQCVDKWYPDMKIEEIAVSCPFCRKNCNCNVCLCSRGMIKTSNRDITDYEKAQNLHYMINLLLPFLKQICHEQNQEEQIEAKILGKHSFEKEIPQSLCGNDERVYCDHCATSIIDLHRSCPSCSYELCLSCCQEIRDGSITPRVEQKFSYVNRGYDYMHGGDPLPVSNDFGTSECHTKLSNVWNAKSDGSIPCAPKEFGGCGSAALELRRVLPSGWISELEIRTRSMLKIWENVNTTLQQKKAVSSYTSLRNEAIKVDINDDNKYCSESSNIQKGGLLLFQKHWANGEPIIVRDALKLGTGLSWKPMVMWRALCENRVSEVGSKMSEVKAIDCLANCEVEIDTHTFFKGYIEGRTYRNLWPEMLKLKDWPPSDKFEDLLPRHCDEFIRSLPFQEYSDPRSGILNLAAKLPAHVLKPDMGPKTYIAYGIKEELGRGDSVTKLHCDMSDAVNILTHTAEVILTDEQHLIISKLKEAHKVQDEREQCAQERVSDSLNGRPFKHNKVRTENKVVLESKEIEKRPIEINGRIFPSYVHEGVTSATENESMETGSALWDIFRREDSEKLETYLRKHSREFRHTYCSPVEQVAHPIHDQCFYLTSEHKKKLKEEFDVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENIHECLRLTNEFRQLPKNHKAREDKLEIKKMIVYAIDEAVTDLKALLNFS* 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g01344 886 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 48 882 IPR045109 GO:0032454|GO:0033169
Phac3g01344 886 SMART cupin_9 565 849 IPR003347 -
Phac3g01344 886 ProSiteProfiles Zinc finger RING-type profile. 164 210 IPR001841 -
Phac3g01344 886 ProSiteProfiles JmjC domain profile. 584 849 IPR003347 -
Phac3g01344 886 Pfam JmjC domain, hydroxylase 726 832 IPR003347 -
Phac3g01344 886 CDD cupin_RmlC-like 773 833 - -
Phac3g01344 886 SUPERFAMILY Clavaminate synthase-like 465 880 - -
Phac3g01344 886 Gene3D Cupin 445 858 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g01344 Phac-Chr3 14744936 14750433 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Phac3g01344 JmjC 8.6e-16 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g01344 K15601 K21989 gmx:100797860 1335.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac3g01344 3 14744936 14750433 Phac3g01344 3 14744936 14750433 ECH