Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g01288 ATGCAAACGTCTCAGAAACACCCAAGTTCGGCTGGTGTACACTTCTATCACCACCAGCCTGTGCGAGGCATTTATCAAGTGTTGAAAAGCGATCTATGCCATGATGGCCGTGATAGCAGCAGCCAGGGAACTAGCGTTTCTTTTGAAACCTGCAAGGAGCAATACTTTACTCTGGAATCATGCCCTGCACCCACTACTGGTTTTTTGGACTGTGATGATTCTCCTTCCTATGCCAGTGTATCATCTAAAAGGAGTCCATTTTCTCCACAAGGTTCTCAGTCTTGCTATTCAGATCACCACCCTTCCTCTGACAACACCTATGGATCGCCAATAAGCGGTTTGTCTAGCGTTGATGATGGGCATGAACTGAAGCACAAACTTAGAGAACTGGAGATTTCATTGTTGGGGCCTGAGGAATTGGACATTGTAGACAGTTTTGGCTGCTGCGTCAAGGGTAGCAGACTCTACGGAGCATCTCAGTTGGCTAAACATAACTGGGATGACATTGCTGAAAATATTTCAGGATATGACCTGAAAGGAGTCCTCAGGTTATGTGCACAGGCCGTGTCTGATGATGATATTCCAACAGCAAGAGGGTGGATGGATAATGTATTGGGAAAAATGGTATCAGTCTCTGGAGATCCGATTCAGAGGTTGGGTGCTTACTTGTTGGAGGGGCTTAGAGCAAGGTTGGAATCATCAGGGGATCTCATCTACAAATCCTTGAAGTGTGAACAACCAACAAGCAAAGAACTAATGAGTTACATGCACATCCTGTACCAGATTTGCCCATACTGGAAGTTTGCATACATATCTGCAAATGCTGTCATCATAGAAGCTATGGCTAATGAGTCCAGGATTCATATAATGGATTTCCAAATAGCGCAGGGCACACAGTGGTATTTACTTATCCAGGCTCTTGCAAATAGGCCTGGGGGACCCCCTTCCCTTCGCGTAACCGGTGTTGATGATTCGCAGTCGTTTCATGCTCGAGGTGGAGGACTTGAGATTGTAGGAGAAAGGTTGTCAGAATTTGCCAGGTCTTGTGGAGTTCCGTTTGAATTCCACAGTGCTGGAATGTCTGGCTGTGAGGTTGTGCGAGGAAATGTTGAAATTCGACCCGGGGAAGCTCTGGCTGTAAATTTTCCTTTTGTTTTGCACCACTTGGCAGATGAGAGTGTGAGCACTGAGAATCACAGAGATAGATTGTTGAGGTTGGTTAAGAGCTTGTCTCCCAAGGTTGTTACCCTTGTCGAGCAAGAATCCAACACCAACACATCTCCTTTCTTTTCCAGGTTTCTTGAGACCCTGGATTATTACACTGCCATGTTTGAATCCATAGATGTGGCTTGCCCCAGAGATGATAAGAAGCGGATTAGCGCAGAGCAGCACTGTGTGGCACGAGACATTGTTAACATGATAGCTTGTGAGGGGGTTGAGAGGGTGGAGAGGCATGAACTTTTGGGTAAGTGGAGGTCAAGACTTTCCATGGCTGGATTTAAACAGTGCCAATTGAGTTCTTCGGTGATGGTTGCTACCCAAAATCTCCTAAACGACTTCAGTCAAAATTACAGGCTTGAACATAGAGATGATGCCCTTTATCTTGGTTGGATGAACAGACATATGGCCACTTCTTCTGCTTGGAGGTGA 1650 0.4588 MQTSQKHPSSAGVHFYHHQPVRGIYQVLKSDLCHDGRDSSSQGTSVSFETCKEQYFTLESCPAPTTGFLDCDDSPSYASVSSKRSPFSPQGSQSCYSDHHPSSDNTYGSPISGLSSVDDGHELKHKLRELEISLLGPEELDIVDSFGCCVKGSRLYGASQLAKHNWDDIAENISGYDLKGVLRLCAQAVSDDDIPTARGWMDNVLGKMVSVSGDPIQRLGAYLLEGLRARLESSGDLIYKSLKCEQPTSKELMSYMHILYQICPYWKFAYISANAVIIEAMANESRIHIMDFQIAQGTQWYLLIQALANRPGGPPSLRVTGVDDSQSFHARGGGLEIVGERLSEFARSCGVPFEFHSAGMSGCEVVRGNVEIRPGEALAVNFPFVLHHLADESVSTENHRDRLLRLVKSLSPKVVTLVEQESNTNTSPFFSRFLETLDYYTAMFESIDVACPRDDKKRISAEQHCVARDIVNMIACEGVERVERHELLGKWRSRLSMAGFKQCQLSSSVMVATQNLLNDFSQNYRLEHRDDALYLGWMNRHMATSSAWR* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g01288 549 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 126 539 IPR005202 -
Phac3g01288 549 Pfam GRAS domain family 181 549 IPR005202 -
Phac3g01288 549 ProSiteProfiles GRAS family profile. 169 549 IPR005202 -
Phac3g01288 549 MobiDBLite consensus disorder prediction 80 114 - -
Phac3g01288 549 MobiDBLite consensus disorder prediction 80 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g01288 Phac-Chr3 13784324 13787677 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g01288 1 549 GRAS Transcription Factor Family AT4G17230 59.710 0.0 623
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Phac3g01288 GRAS 4.2e-123 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g01288 - - gmx:100776109 995.727