Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g01276 ATGGGTGGAGATGAGGCTCGAGAATCATTGCTTTCAGAACATTCCAATGAGAAAAATGACCTTGACAGGAGAAAGCCTAGTGGTAATGGTTCGGAGAAGGAGATCAACCTCAAAGGAAAAAATGATGAGCAAAAGGCTTTGCATCCTCAATGTATAGATGCAAAACCACAAGCAGAATTCAATTTCAAGGCAGTCTTCTTATGGTTAGCTGCATACCTAGGGGGAGGAACTATTTGCTTCCTTCTCACAAATCATGAGATAAAGGGCATAAAAACCAATGGGTTTCTTGATGCCATTTACTTCTGTGTTGTAACAATGACAACAGTTGGATATGGAGATCTTGTGCCAGATAGCCAAGTGTCAAAACTTCTTGCTTGCATTTACGTCTTCACTGGAATGGCTCTTGTAGGGCTAATTCTTAGCAAGGCAGCAGATTATATTGTTGAAAAGCAGGAACTCAACCTAGTTAAAACCTTATTCAAGGGTGCAAATTTTGGTTCACAAGAGCTTTCAAAAGAGGTTGAAACCAACAAAGCTAAATACAAATTCATCCTGACAGCATCCATCTTTTTGGTGCTTATGATTGTGGGGACTAGTTTTCTTTATTTTATTGAAAATCTAGATTTTGTTGATGCCCTTTATTGTGTTTGTTCCACAGTCACTACTTTAGGTTATGGGGATAAGAGCTTTTCCACTACTGTTGGTCGTGCTTTTGCTGTGTTCTGGATATTGAGCAGCACCCTTTGCTTAGCTCAGTCTTTTGCTTATCTTGCTGAACTTTATACTGAAAAAAGACAGAGATCCCTGGCAAAAATGGTTCTTGCACGAAAATTGTCACTCCTTGATCTTGAGGCAGCTGATCTCGATGGAGATCATGTAGTCAGTTCTACAGAGTTCGTTTTGTATAAGTTGAAAGAAATGGGAAAGATCAGCCAAGAGGATATTTTAGTTGTTATGGATATTTTTAGACAACTAGATTTTGATCAATCAGGAACCCTGACAGAAGCGGATCTCAGATAA 1020 0.3912 MGGDEARESLLSEHSNEKNDLDRRKPSGNGSEKEINLKGKNDEQKALHPQCIDAKPQAEFNFKAVFLWLAAYLGGGTICFLLTNHEIKGIKTNGFLDAIYFCVVTMTTVGYGDLVPDSQVSKLLACIYVFTGMALVGLILSKAADYIVEKQELNLVKTLFKGANFGSQELSKEVETNKAKYKFILTASIFLVLMIVGTSFLYFIENLDFVDALYCVCSTVTTLGYGDKSFSTTVGRAFAVFWILSSTLCLAQSFAYLAELYTEKRQRSLAKMVLARKLSLLDLEAADLDGDHVVSSTEFVLYKLKEMGKISQEDILVVMDIFRQLDFDQSGTLTEADLR* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g01276 339 ProSitePatterns EF-hand calcium-binding domain. 326 338 IPR018247 -
Phac3g01276 339 Gene3D - 48 163 - -
Phac3g01276 339 MobiDBLite consensus disorder prediction 1 39 - -
Phac3g01276 339 SUPERFAMILY Voltage-gated potassium channels 176 277 - -
Phac3g01276 339 SUPERFAMILY Voltage-gated potassium channels 60 149 - -
Phac3g01276 339 Gene3D - 184 256 - -
Phac3g01276 339 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 65 315 IPR003280 GO:0005267|GO:0016020|GO:0071805
Phac3g01276 339 Gene3D - 257 339 - -
Phac3g01276 339 Pfam Ion channel 189 261 IPR013099 -
Phac3g01276 339 Pfam Ion channel 69 148 IPR013099 -
Phac3g01276 339 SUPERFAMILY EF-hand 284 339 IPR011992 -
Phac3g01276 339 Coils Coil 335 339 - -
Phac3g01276 339 FunFam Calcium-activated outward-rectifying potassium channel 1 59 154 - -
Phac3g01276 339 ProSiteProfiles EF-hand calcium-binding domain profile. 313 339 IPR002048 GO:0005509
Phac3g01276 339 PRINTS Two pore domain K+ channel signature 221 230 IPR003280 GO:0005267|GO:0016020|GO:0071805
Phac3g01276 339 PRINTS Two pore domain K+ channel signature 104 132 IPR003280 GO:0005267|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g01276 Phac-Chr3 13649679 13650899 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g01276 43 338 Ion Channels AT5G55630 55.743 4.18e-116 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g01276 K05389 - gmx:100799492 547.74