Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g01226 ATGGAAAGTGGAGGCTTTCATGGCTACCGCAAGCTCCCCAACACCACCTCTGCTGCTGGGTTGAAGCTGTCAGTGTCAGACATGAACACGAGTAGGCAGGTAGCAGGAGACAACAACCACACAGCGGATGAGAGCAACGAATGCACTGTGAGGGAGCAAGACCGTTTCATGCCAATCGCAAATGTGATCAGGATCATGCGAAAGATTCTTCCTCCACATGCCAAGATCTCAGATGATGCCAAAGAAACAATTCAAGAGTGTGTGTCTGAGTACATCAGCTTTATCACCGGAGAGGCAAACGAGCGTTGCCAGAGGGAACAACGCAAGACCATAACTGCTGAGGACGTGCTTTGGGCCATGAGCAAGCTTGGATTTGATGATTACATGGAGCCACTGACCATGTACCTTCACAGGTATCGTGAGCTTGAGGGTGACCGAACCTCCATAAGAGGTGAATCACTGGGGAAGAGGACTATTGAATACACTCCTATGGGTGTTGGCGTTGCTACTGCTTTTGTGCCACCACAGTTTCACCCAAATGGATACTATGGTGCTGCCATGGGAGCTTACGTTGCGCCACCAAATGCTGCGTCCTCTCATCACCATGGAATGCCAAATACTGAACCGAATGCTCGCTCCATGTGA 645 0.5023 MESGGFHGYRKLPNTTSAAGLKLSVSDMNTSRQVAGDNNHTADESNECTVREQDRFMPIANVIRIMRKILPPHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTITAEDVLWAMSKLGFDDYMEPLTMYLHRYRELEGDRTSIRGESLGKRTIEYTPMGVGVATAFVPPQFHPNGYYGAAMGAYVAPPNAASSHHHGMPNTEPNARSM* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g01226 214 Gene3D Histone, subunit A 43 161 IPR009072 GO:0046982
Phac3g01226 214 ProSitePatterns NF-YB/HAP3 subunit signature. 87 103 IPR003956 GO:0005634|GO:0006355|GO:0043565
Phac3g01226 214 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 36 184 IPR027113 GO:0001228|GO:0006355|GO:0016602
Phac3g01226 214 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 56 120 IPR003958 -
Phac3g01226 214 FunFam Nuclear transcription factor Y subunit B-6 45 161 - -
Phac3g01226 214 SUPERFAMILY Histone-fold 53 150 IPR009072 GO:0046982
Phac3g01226 214 PRINTS CCAAT-binding transcription factor subunit A signature 122 140 - -
Phac3g01226 214 PRINTS CCAAT-binding transcription factor subunit A signature 103 121 - -
Phac3g01226 214 PRINTS CCAAT-binding transcription factor subunit A signature 84 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g01226 Phac-Chr3 12133120 12135678 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g01226 1 146 CCAAT-HAP3 Transcription Factor Family AT5G47670 73.203 1.84e-73 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Phac3g01226 CBFD_NFYB_HMF 5.9e-26 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g01226 K08065 - gmx:100800011 332.798