Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g01222 ATGGATGAACAATTGAGGTTGCTAAAAGTTATTGTTGTGAAAGGGAAAAGATTAGTTATCCGGGATTTCAAGAGCAGTGACCCTTATGTTGTTGTCAAGCTGGGGAACCAGACAGCAAAGACCAGGGTCATCCACTGTTCCTTGAATCCTGTTTGGAATGAAGAGCTGAATTTCACTCTGACTGAACCTTCTGGACTTCTGAATTTGGAAGTGTTTGACAAAGATTTTTTGAAGGCTGATGACAAGATGGGGAGTAGTTATCTGAGCCTTCAACCATTGATGTCTGCGTCTAGATTAAGAGATATTTTGAAGCTGTCCTCTGCATCTGGTGAGACAACATTGAGGAAGGTGACACCAGACAGTGAAAATTGTCTTGCACGTGAAAGCAGTATCACTTGTGTTAATGGTGAAGTGGTACAAAATGTTTGGTTAAGGCTTCTTGGGGTTGAGTCTGGGGAGCTACAATTGACTATCAAGTTCATAACTTCCTTAAATTAA 498 0.4096 MDEQLRLLKVIVVKGKRLVIRDFKSSDPYVVVKLGNQTAKTRVIHCSLNPVWNEELNFTLTEPSGLLNLEVFDKDFLKADDKMGSSYLSLQPLMSASRLRDILKLSSASGETTLRKVTPDSENCLARESSITCVNGEVVQNVWLRLLGVESGELQLTIKFITSLN* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g01222 165 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 4 161 IPR044562 -
Phac3g01222 165 CDD C2_ArfGAP 7 152 - -
Phac3g01222 165 PRINTS C2 domain signature 67 75 IPR000008 -
Phac3g01222 165 PRINTS C2 domain signature 46 59 IPR000008 -
Phac3g01222 165 PRINTS C2 domain signature 22 34 IPR000008 -
Phac3g01222 165 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Phac3g01222 165 Pfam C2 domain 8 101 IPR000008 -
Phac3g01222 165 Gene3D C2 domain 1 118 IPR035892 -
Phac3g01222 165 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 161 IPR035892 -
Phac3g01222 165 SMART C2_3c 7 102 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g01222 Phac-Chr3 12043251 12044569 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g01222 1 161 C2H2 Transcription Factor Family AT4G21160 41.358 8.46e-33 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g01222 - - pvu:PHAVU_003G087500g 320.472