Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g01218 ATGGAGTACCCCGAAAACAACTGCTATAGAAGCAGCAGCGTGTGTGAGATAGAGGAGGAAGAGGACCACAACCAATCTCAACACCATCTTGGGCCTATAGCCACTATTCACGGGAAAGAAGAAGAAGAAGAACATGAACAAGACTGTGTTTATGTTGCAGTGGGTAAGAGCAACACAAGCATGTACGCTCTCTCATGGACACTTAACAACTTGGTTACTCAATCTACCATCATTTATCTCGTTCATGTATTCCCTCAGATCAAACACATTCCAAATCCAATGGGAACAGGAATGGTTCCAAGGAATCAAGTGAGTGCTAAGCAGGTGGAGAGTTATATTGACAAAGAAAGAGGCAAGAGGAGAGAGCTCCTTCAGAAATTCCTACAATCATGCTCTTCTTCTAAGGTTAAGGTAGATACCATCCTGATTGAGAGTGACATAGTTGCAAAGGCTATCCTCGACCTCATTCCCATTCTTCAAATAAAAAGTCTTGTCATTGGAGCCAACAAATTCTATCTAAGAAAATCAAAATCAAGGAAAGGGAATAGTGTTGCTGATAAGATACTGCAGAATTCACCAGAAAGTTGCAAGGTGAGAATTATATGTGAAGGGAAGGAAGTAAATGAGCAGATGATGATGTCACCCCCTCCTCCCACCTCTGCTAACGATACTTCCATGACCAGCCAAAAGGAAGATCATGATTCAGAGGAGCAGGATGAGTGCATGCCCTGCGATACGCATGAAGAAAGCTCCAGTTGCTTTGGATGTGGTTTGATAGGGTTGAAGAGAAACCAAGTCATAGATTGCAGTCTTAGCCGCAGAAGCAGCAGCAGAAGCAAGAAGAGCGAGATAGGAGATTCAGATTCGGAGGAGCTGTTTGAGATCAATCTGAAGGAGCCTTTGGTTTTGGATTCCACAAGAGAAGACTGCGAGAGCACTGTGTTTTCTCTTGATATCCACGACTGCAATAATGATGATGAAGATGATGATGTTGTTTATGTGGCAGTAGGCAAGGATGAAGATTCCAGTCCAAGCATGGAAGCTCTTTCATGGGCCTTGAAGCACGCCGTGACACCCTCTGCCACCGTAGTCTGTCTTCTACACGTTTTCCCTCAAGTCAAGCTCATTCCAAGTCCACTAGGAAAAATTCCAAGGAGTCACGTAAATCTAGAGTATACTAACATGCACTTGACACAAGAGAGAGCCAAGAGGAAACTGCTTCTTCAAAAGTTCATTGACCTCTGCGTTCATTCTAAGGTTAAGGTGGAGATAATGCTGATTGAGGGTGACAACGCTGGTAGAGCTATCGTGGACCTTGTTCGAAATCTTAATATAAGAAAACTGGTTATCGGAATTTCCAGATCTAATTTAAGAAAATGTGAATCTGGAAGGAAGAATGGCACAGCGGCCAAAGTAGTAAAATATGCACAGGAGAGTTGTGATATAAAAATCATATGTGAAGGAAGAGAAGTGATAGAGCAGATGAGTGAGTGCACTTCACCACGTTTCACAGACAATGCGAGTTCAACAGCTTCAGAGGAAATGAAAGAATTCCGTGGATTTGTCCCACTTAAGCATTTTATGTCCAATTGGCTATGGTTATTTAGGTCCATCATCACCAAAGATAAGAGGAGTAAATATGCATAA 1647 0.4256 MEYPENNCYRSSSVCEIEEEEDHNQSQHHLGPIATIHGKEEEEEHEQDCVYVAVGKSNTSMYALSWTLNNLVTQSTIIYLVHVFPQIKHIPNPMGTGMVPRNQVSAKQVESYIDKERGKRRELLQKFLQSCSSSKVKVDTILIESDIVAKAILDLIPILQIKSLVIGANKFYLRKSKSRKGNSVADKILQNSPESCKVRIICEGKEVNEQMMMSPPPPTSANDTSMTSQKEDHDSEEQDECMPCDTHEESSSCFGCGLIGLKRNQVIDCSLSRRSSSRSKKSEIGDSDSEELFEINLKEPLVLDSTREDCESTVFSLDIHDCNNDDEDDDVVYVAVGKDEDSSPSMEALSWALKHAVTPSATVVCLLHVFPQVKLIPSPLGKIPRSHVNLEYTNMHLTQERAKRKLLLQKFIDLCVHSKVKVEIMLIEGDNAGRAIVDLVRNLNIRKLVIGISRSNLRKCESGRKNGTAAKVVKYAQESCDIKIICEGREVIEQMSECTSPRFTDNASSTASEEMKEFRGFVPLKHFMSNWLWLFRSIITKDKRSKYA* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g01218 548 Gene3D HUPs 329 482 IPR014729 -
Phac3g01218 548 Gene3D HUPs 43 213 IPR014729 -
Phac3g01218 548 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 8 240 - -
Phac3g01218 548 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 341 458 - -
Phac3g01218 548 CDD STK_N 50 204 - -
Phac3g01218 548 MobiDBLite consensus disorder prediction 210 243 - -
Phac3g01218 548 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 51 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g01218 Phac-Chr3 11999017 12018010 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g01218 335 510 Plant U-box Gene Family AT5G57035 27.119 5.25e-11 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g01218 - - vun:114175946 390.578