LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac3g01195	ATGAGGGGATGGGACCCATTCCATCACGGTGGAAAGGAACTTGTCAACATGATATCACCGGCTTCCGTTGCAACAGTGTTACGTTCTGATAATATATGCAGGAAGCTTATAGGGGCAAGGTACTTCAACAAAGGTTATCTTGCCTATGTGGGAGGAATAGCAAAATTTAACAGGACACTGAACACAGCACGAGACTATGAGGGTCATGGATCTCACACACTGTCAACAATAGGAGGGACCTTTGTTCCTGGAGCCAATGTGTTTGGCTTTGGAAATGGAACTGCCGAAGGTGGCTCTCCTAAGGCCCGGGTTGCATCTTACAAGGTGTGCTGGCCACCATTTGAAGGCAATGAATGCTTTGATGCTGATATCATGGCAGGCTTAGACATGGCCATACATGATGGGGTTGATGTTCTCTCCCTCTCTCTTGGAGGGCTTGCTTTGGATTACTTTGAGGATGGTATAGCAATCGGGGCCTTTCATGCTAACATGAAGGGCATTCCTGTTGTATGTTCTGCTGGAAATTCCGGACCATCGCCTGGAACTGTCGCTAATGTTGCACCTTGGATAGTAACAGTTGGTGCAAGCACGTTGGACAGAGAGTTTGACGCTGTTGTTCAACTCCACAATGGACAACGCTTCAAGGGAGCAAGCCTTGCCAAAGCTATGCCGGAATCCAAGTTTTACCCACTCATCAAAGCAGCAGATGCAAAATTGGCCAAGGAATCAGTTGAAAACGCTACTCTGTGTATACGAGGAACAATTGACCCTGAAAAGGCGAGGGGCAAAATATTGGTTTGCCTTAGAGGTATCAATCCAAGAGTGGAAAAGAGTCTGGTTGCTTTGGAGGCTGGTGCAGCTGGGATGATTCTTTGTAATGACGAGTTAAGTGGCAATGAGCTTATTGCTGATCCTCATCTCCTTCCTGCATCACAAGTTACTTATAAAGATGGTCTTGCTGTCTATGCCTACGTGAACTCAACTAAGAATCCACTAGGATATATTGAACTACCCGAGACCAAGTTGCGGACAAAGCCTGCCCCAGTCATGGCAGCTTTCTCCTCAAGAGGGCCCAACCTAGTCACCCCAGAGATCCTTAAGCCTGATGTCACCGCTCCAGGTGTGAACATTATTGCTGCCTACTCAGGAGCTGTCAGCCCCACCGAATTGAATTTTGACAAGCGCAGGGTTCCTTTTATCACCATGTCTGGAACATCCATGTCTTGTCCTCATGTGGCTGGAGTTGTTGGCCTTCTCCGGACTCTCTATCCTACTTGGAGTCCAGCAGCTATTAAATCTGCAATAATGACAACTGCCAGGACAAGGGACAACACTGGCAAGCCGATGCTTGATGGGAATAATGGTAAGGCAACGCCATTTGCATATGGGTCTGGCCATATCAGACCAAATCGTGCCATGGATCCCGGGTTGGTGTATGACTTAACCATGAATGATTACCTAAACTTTCTTTGTATCTCTGGTTATAACCAGACTCAGATAAAGACGTTCTCTGGTGCACATTATCGTTGCCCTGATATAATAGACATCCTGGATTTCAACTACCCTACAATGACAATACCAAAACTTTATGGCTCAGCTAGTTTGACACGGAGGGTGAAAAATGTTGGGTCACCAGCCACTTACACTGCAAGTCTTAGAGTACCAGCAGGCCTTTCCATCTCTGTGGAGCCTAATGTGTTGAAATTTGACAAAATTGGGGAAGAGAAGAGCTATAAGTTGACAGTGAAAGTAACAAGACCGGGTGAGGCTACAACATTTGGAGGCATAACTTGGTCAGATGGGAAACATCAAGTGAGGAGTCCAATTGTAGTTGGTGGAGTTAGAGGGTAG	1851	0.4652	MRGWDPFHHGGKELVNMISPASVATVLRSDNICRKLIGARYFNKGYLAYVGGIAKFNRTLNTARDYEGHGSHTLSTIGGTFVPGANVFGFGNGTAEGGSPKARVASYKVCWPPFEGNECFDADIMAGLDMAIHDGVDVLSLSLGGLALDYFEDGIAIGAFHANMKGIPVVCSAGNSGPSPGTVANVAPWIVTVGASTLDREFDAVVQLHNGQRFKGASLAKAMPESKFYPLIKAADAKLAKESVENATLCIRGTIDPEKARGKILVCLRGINPRVEKSLVALEAGAAGMILCNDELSGNELIADPHLLPASQVTYKDGLAVYAYVNSTKNPLGYIELPETKLRTKPAPVMAAFSSRGPNLVTPEILKPDVTAPGVNIIAAYSGAVSPTELNFDKRRVPFITMSGTSMSCPHVAGVVGLLRTLYPTWSPAAIKSAIMTTARTRDNTGKPMLDGNNGKATPFAYGSGHIRPNRAMDPGLVYDLTMNDYLNFLCISGYNQTQIKTFSGAHYRCPDIIDILDFNYPTMTIPKLYGSASLTRRVKNVGSPATYTASLRVPAGLSISVEPNVLKFDKIGEEKSYKLTVKVTRPGEATTFGGITWSDGKHQVRSPIVVGGVRG*	617

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac3g01195	616	FunFam	Subtilisin-like protease SBT1.5	490	613	-	-
	Phac3g01195	616	SUPERFAMILY	PA domain	259	328	IPR046450	-
	Phac3g01195	616	SUPERFAMILY	Subtilisin-like	32	477	IPR036852	GO:0004252\|GO:0006508
	Phac3g01195	616	Pfam	PA domain	250	320	IPR003137	-
	Phac3g01195	616	CDD	PA_subtilisin_like	205	335	-	-
	Phac3g01195	616	ProSitePatterns	Serine proteases, subtilase family, serine active site.	404	414	IPR023828	-
	Phac3g01195	616	PRINTS	Subtilisin serine protease family (S8) signature	65	78	IPR015500	-
	Phac3g01195	616	PRINTS	Subtilisin serine protease family (S8) signature	403	419	IPR015500	-
	Phac3g01195	616	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	31	611	IPR045051	-
	Phac3g01195	616	Pfam	Subtilase family	52	451	IPR000209	GO:0006508\|GO:0008236
	Phac3g01195	616	Pfam	Fibronectin type-III domain	518	611	IPR041469	-
	Phac3g01195	616	Gene3D	Peptidase S8/S53 domain	32	486	IPR036852	GO:0004252\|GO:0006508
	Phac3g01195	616	Gene3D	-	490	613	-	-
	Phac3g01195	616	FunFam	subtilisin-like protease SBT1.5	199	342	-	-
	Phac3g01195	616	Gene3D	-	199	343	-	-
	Phac3g01195	616	ProSiteProfiles	Serine proteases, subtilase domain profile.	1	473	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac3g01195	Phac-Chr3	11833092	11836556	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac3g01195	34	611	Subtilisin-like Serine Gene Family	AT5G59810	63.058	0.0	749

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac3g01195	-		-	pvu:PHAVU_003G089100g	1071.23